Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC093014.1-201ENST00000548926 724 ntBASIC4.95□□□□□ -1.62
SCN1BQ07699 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.95□□□□□ -1.62
SCN1BQ07699 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.95□□□□□ -1.62
SCN1BQ07699 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.95□□□□□ -1.62
SCN1BQ07699 AGGF1P7-201ENST00000562369 913 ntBASIC4.95□□□□□ -1.62
SCN1BQ07699 AC092332.1-201ENST00000563684 829 ntBASIC4.95□□□□□ -1.62
SCN1BQ07699 MTCYBP13-201ENST00000578634 1093 ntBASIC4.95□□□□□ -1.62
SCN1BQ07699 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.95□□□□□ -1.62
SCN1BQ07699 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.95□□□□□ -1.62
SCN1BQ07699 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SCN1BQ07699 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SCN1BQ07699 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SCN1BQ07699 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.95□□□□□ -1.62
SCN1BQ07699 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SCN1BQ07699 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SCN1BQ07699 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.94□□□□□ -1.62
SCN1BQ07699 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SCN1BQ07699 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SCN1BQ07699 AC114947.2-201ENST00000565748 2125 ntBASIC4.94□□□□□ -1.62
SCN1BQ07699 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
SCN1BQ07699 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SCN1BQ07699 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SCN1BQ07699 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
SCN1BQ07699 AL354854.1-201ENST00000455940 1363 ntBASIC4.94□□□□□ -1.62
SCN1BQ07699 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SCN1BQ07699 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SCN1BQ07699 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
SCN1BQ07699 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SCN1BQ07699 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SCN1BQ07699 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SCN1BQ07699 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SCN1BQ07699 SNORA62.2-201ENST00000364672 152 ntBASIC4.94□□□□□ -1.62
SCN1BQ07699 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SCN1BQ07699 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.94□□□□□ -1.62
SCN1BQ07699 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SCN1BQ07699 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC4.94□□□□□ -1.62
SCN1BQ07699 RNU6-603P-201ENST00000411403 107 ntBASIC4.94□□□□□ -1.62
SCN1BQ07699 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC4.94□□□□□ -1.62
SCN1BQ07699 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.94□□□□□ -1.62
SCN1BQ07699 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC4.94□□□□□ -1.62
SCN1BQ07699 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC4.94□□□□□ -1.62
SCN1BQ07699 RPS4XP16-201ENST00000427198 791 ntBASIC4.94□□□□□ -1.62
SCN1BQ07699 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC4.94□□□□□ -1.62
SCN1BQ07699 RPL7AP49-201ENST00000429522 581 ntBASIC4.94□□□□□ -1.62
SCN1BQ07699 AL591438.1-201ENST00000433508 581 ntBASIC4.94□□□□□ -1.62
SCN1BQ07699 RPS12P17-201ENST00000438591 377 ntBASIC4.94□□□□□ -1.62
SCN1BQ07699 GTF3AP5-201ENST00000442645 697 ntBASIC4.94□□□□□ -1.62
SCN1BQ07699 RPL34P26-201ENST00000445636 354 ntBASIC4.94□□□□□ -1.62
SCN1BQ07699 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC4.94□□□□□ -1.62
SCN1BQ07699 AC009963.3-201ENST00000458090 486 ntBASIC4.94□□□□□ -1.62
SCN1BQ07699 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.94□□□□□ -1.62
SCN1BQ07699 RPL23AP12-201ENST00000467573 473 ntBASIC4.94□□□□□ -1.62
SCN1BQ07699 RN7SL269P-201ENST00000467795 305 ntBASIC4.94□□□□□ -1.62
SCN1BQ07699 AC023245.1-201ENST00000468501 517 ntBASIC4.94□□□□□ -1.62
SCN1BQ07699 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.94□□□□□ -1.62
SCN1BQ07699 AP000797.2-201ENST00000475768 606 ntBASIC4.94□□□□□ -1.62
SCN1BQ07699 AC099521.1-201ENST00000482557 334 ntBASIC4.94□□□□□ -1.62
SCN1BQ07699 ATP5LP5-201ENST00000483050 299 ntBASIC4.94□□□□□ -1.62
SCN1BQ07699 RPL37AP8-201ENST00000494116 276 ntBASIC4.94□□□□□ -1.62
SCN1BQ07699 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SCN1BQ07699 RFPL4AP5-201ENST00000514977 504 ntBASIC4.94□□□□□ -1.62
SCN1BQ07699 AC103833.1-201ENST00000517442 172 ntBASIC4.94□□□□□ -1.62
SCN1BQ07699 IGKV2D-10-201ENST00000520194 281 ntBASIC4.94□□□□□ -1.62
SCN1BQ07699 AP006245.2-201ENST00000522004 300 ntBASIC4.94□□□□□ -1.62
SCN1BQ07699 AC013701.1-201ENST00000522657 465 ntBASIC4.94□□□□□ -1.62
SCN1BQ07699 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.94□□□□□ -1.62
SCN1BQ07699 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC4.94□□□□□ -1.62
SCN1BQ07699 FAU-203ENST00000525297 355 ntTSL 5 BASIC4.94□□□□□ -1.62
SCN1BQ07699 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC4.94□□□□□ -1.62
SCN1BQ07699 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.94□□□□□ -1.62
SCN1BQ07699 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC4.94□□□□□ -1.62
SCN1BQ07699 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC4.94□□□□□ -1.62
SCN1BQ07699 ARGFXP2-201ENST00000579304 949 ntBASIC4.94□□□□□ -1.62
SCN1BQ07699 MIR4701-201ENST00000583094 63 ntBASIC4.94□□□□□ -1.62
SCN1BQ07699 PRPF19P1-201ENST00000584766 898 ntBASIC4.94□□□□□ -1.62
SCN1BQ07699 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC4.94□□□□□ -1.62
SCN1BQ07699 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.94□□□□□ -1.62
SCN1BQ07699 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
SCN1BQ07699 AC068768.2-201ENST00000602352 343 ntBASIC4.94□□□□□ -1.62
SCN1BQ07699 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SCN1BQ07699 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.94□□□□□ -1.62
SCN1BQ07699 AC139769.3-201ENST00000618383 175 ntBASIC4.94□□□□□ -1.62
SCN1BQ07699 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.94□□□□□ -1.62
SCN1BQ07699 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.94□□□□□ -1.62
SCN1BQ07699 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SCN1BQ07699 OR11H2-202ENST00000641517 1085 ntBASIC4.94□□□□□ -1.62
SCN1BQ07699 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SCN1BQ07699 AL359715.3-201ENST00000569267 2123 ntBASIC4.94□□□□□ -1.62
SCN1BQ07699 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SCN1BQ07699 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC4.94□□□□□ -1.62
SCN1BQ07699 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SCN1BQ07699 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC4.94□□□□□ -1.62
SCN1BQ07699 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.94□□□□□ -1.62
SCN1BQ07699 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SCN1BQ07699 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.93□□□□□ -1.62
SCN1BQ07699 AC090181.3-201ENST00000624777 1514 ntBASIC4.93□□□□□ -1.62
SCN1BQ07699 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SCN1BQ07699 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
SCN1BQ07699 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.93□□□□□ -1.62
SCN1BQ07699 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms