Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.01□□□□□ -1.77
HIST1H1AQ02539 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.01□□□□□ -1.77
HIST1H1AQ02539 SNORD46.2-201ENST00000516021 102 ntBASIC4.01□□□□□ -1.77
HIST1H1AQ02539 AC021733.2-201ENST00000518830 497 ntBASIC4.01□□□□□ -1.77
HIST1H1AQ02539 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.01□□□□□ -1.77
HIST1H1AQ02539 AP004607.2-201ENST00000533949 322 ntBASIC4.01□□□□□ -1.77
HIST1H1AQ02539 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
HIST1H1AQ02539 AC078878.1-201ENST00000539832 958 ntBASIC4.01□□□□□ -1.77
HIST1H1AQ02539 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HIST1H1AQ02539 NANOGNBP2-201ENST00000544753 553 ntBASIC4.01□□□□□ -1.77
HIST1H1AQ02539 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HIST1H1AQ02539 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.01□□□□□ -1.77
HIST1H1AQ02539 AC010547.6-201ENST00000571789 193 ntBASIC4.01□□□□□ -1.77
HIST1H1AQ02539 MIR4505-201ENST00000582238 73 ntBASIC4.01□□□□□ -1.77
HIST1H1AQ02539 AC087283.1-201ENST00000604029 1074 ntBASIC4.01□□□□□ -1.77
HIST1H1AQ02539 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.01□□□□□ -1.77
HIST1H1AQ02539 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC4.01□□□□□ -1.77
HIST1H1AQ02539 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.01□□□□□ -1.77
HIST1H1AQ02539 AC015914.2-201ENST00000618167 288 ntBASIC4.01□□□□□ -1.77
HIST1H1AQ02539 MIR6839-201ENST00000620425 113 ntBASIC4.01□□□□□ -1.77
HIST1H1AQ02539 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
HIST1H1AQ02539 AC073869.10-201ENST00000642016 354 ntBASIC4.01□□□□□ -1.77
HIST1H1AQ02539 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HIST1H1AQ02539 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.01□□□□□ -1.77
HIST1H1AQ02539 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.01□□□□□ -1.77
HIST1H1AQ02539 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HIST1H1AQ02539 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
HIST1H1AQ02539 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
HIST1H1AQ02539 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4□□□□□ -1.77
HIST1H1AQ02539 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4□□□□□ -1.77
HIST1H1AQ02539 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4□□□□□ -1.77
HIST1H1AQ02539 UGT2B26P-201ENST00000508672 1613 ntBASIC4□□□□□ -1.77
HIST1H1AQ02539 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4□□□□□ -1.77
HIST1H1AQ02539 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HIST1H1AQ02539 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
HIST1H1AQ02539 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HIST1H1AQ02539 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HIST1H1AQ02539 SNORA16A-201ENST00000384342 137 ntBASIC4□□□□□ -1.77
HIST1H1AQ02539 MIR621-201ENST00000384919 96 ntBASIC4□□□□□ -1.77
HIST1H1AQ02539 GAPDHP15-201ENST00000398586 975 ntBASIC4□□□□□ -1.77
HIST1H1AQ02539 DBIP1-201ENST00000401435 260 ntBASIC4□□□□□ -1.77
HIST1H1AQ02539 FGF12-202ENST00000430714 603 ntTSL 2 BASIC4□□□□□ -1.77
HIST1H1AQ02539 AC002504.1-201ENST00000438281 691 ntBASIC4□□□□□ -1.77
HIST1H1AQ02539 SUMO2P3-201ENST00000438311 288 ntBASIC4□□□□□ -1.77
HIST1H1AQ02539 MTND6P18-201ENST00000439477 513 ntBASIC4□□□□□ -1.77
HIST1H1AQ02539 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4□□□□□ -1.77
HIST1H1AQ02539 AC105399.1-202ENST00000447303 205 ntBASIC4□□□□□ -1.77
HIST1H1AQ02539 DNAJB5P1-201ENST00000454004 806 ntBASIC4□□□□□ -1.77
HIST1H1AQ02539 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
HIST1H1AQ02539 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4□□□□□ -1.77
HIST1H1AQ02539 PSMA2P2-201ENST00000504319 686 ntBASIC4□□□□□ -1.77
HIST1H1AQ02539 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4□□□□□ -1.77
HIST1H1AQ02539 HMGB1P44-201ENST00000508597 572 ntBASIC4□□□□□ -1.77
HIST1H1AQ02539 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4□□□□□ -1.77
HIST1H1AQ02539 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4□□□□□ -1.77
HIST1H1AQ02539 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4□□□□□ -1.77
HIST1H1AQ02539 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4□□□□□ -1.77
HIST1H1AQ02539 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4□□□□□ -1.77
HIST1H1AQ02539 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4□□□□□ -1.77
HIST1H1AQ02539 AC060766.1-201ENST00000590824 627 ntBASIC4□□□□□ -1.77
HIST1H1AQ02539 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC4□□□□□ -1.77
HIST1H1AQ02539 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC4□□□□□ -1.77
HIST1H1AQ02539 TAS2R6P-201ENST00000605022 826 ntBASIC4□□□□□ -1.77
HIST1H1AQ02539 AP003499.2-201ENST00000624100 483 ntBASIC4□□□□□ -1.77
HIST1H1AQ02539 AP000648.2-201ENST00000624182 404 ntBASIC4□□□□□ -1.77
HIST1H1AQ02539 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4□□□□□ -1.77
HIST1H1AQ02539 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4□□□□□ -1.77
HIST1H1AQ02539 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
HIST1H1AQ02539 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4□□□□□ -1.77
HIST1H1AQ02539 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4□□□□□ -1.77
HIST1H1AQ02539 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4□□□□□ -1.77
HIST1H1AQ02539 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4□□□□□ -1.77
HIST1H1AQ02539 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4□□□□□ -1.77
HIST1H1AQ02539 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
HIST1H1AQ02539 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4□□□□□ -1.77
HIST1H1AQ02539 LDHAL6CP-202ENST00000550738 3224 ntBASIC4□□□□□ -1.77
HIST1H1AQ02539 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HIST1H1AQ02539 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
HIST1H1AQ02539 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
HIST1H1AQ02539 MIPEPP2-201ENST00000422560 1819 ntBASIC4□□□□□ -1.77
HIST1H1AQ02539 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HIST1H1AQ02539 OR13C1P-202ENST00000641378 2919 ntBASIC3.99□□□□□ -1.77
HIST1H1AQ02539 AC093535.2-201ENST00000624769 2326 ntBASIC3.99□□□□□ -1.77
HIST1H1AQ02539 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC3.99□□□□□ -1.77
HIST1H1AQ02539 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC3.99□□□□□ -1.77
HIST1H1AQ02539 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.99□□□□□ -1.77
HIST1H1AQ02539 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
HIST1H1AQ02539 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HIST1H1AQ02539 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HIST1H1AQ02539 OR52B1P-201ENST00000316506 909 ntBASIC3.99□□□□□ -1.77
HIST1H1AQ02539 RNA5SP223-201ENST00000365174 120 ntBASIC3.99□□□□□ -1.77
HIST1H1AQ02539 MIR105-1-201ENST00000385222 81 ntBASIC3.99□□□□□ -1.77
HIST1H1AQ02539 AL596448.1-201ENST00000415024 392 ntBASIC3.99□□□□□ -1.77
HIST1H1AQ02539 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC3.99□□□□□ -1.77
HIST1H1AQ02539 AC073136.2-201ENST00000417282 849 ntBASIC3.99□□□□□ -1.77
HIST1H1AQ02539 CYCSP10-201ENST00000417973 294 ntBASIC3.99□□□□□ -1.77
HIST1H1AQ02539 AC013470.3-201ENST00000420252 1194 ntBASIC3.99□□□□□ -1.77
HIST1H1AQ02539 SRSF1P1-201ENST00000424058 520 ntBASIC3.99□□□□□ -1.77
HIST1H1AQ02539 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC3.99□□□□□ -1.77
HIST1H1AQ02539 AC046176.1-201ENST00000435260 1170 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms