Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC108738.1-201ENST00000603703 237 ntBASIC2.99□□□□□ -1.93
HSPG2P98160 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.99□□□□□ -1.93
HSPG2P98160 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC2.99□□□□□ -1.93
HSPG2P98160 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC2.99□□□□□ -1.93
HSPG2P98160 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HSPG2P98160 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HSPG2P98160 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
HSPG2P98160 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HSPG2P98160 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HSPG2P98160 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HSPG2P98160 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HSPG2P98160 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
HSPG2P98160 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC2.98□□□□□ -1.93
HSPG2P98160 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HSPG2P98160 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC2.98□□□□□ -1.93
HSPG2P98160 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
HSPG2P98160 RNU1-59P-201ENST00000364829 162 ntBASIC2.98□□□□□ -1.93
HSPG2P98160 AC233289.1-201ENST00000403700 508 ntBASIC2.98□□□□□ -1.93
HSPG2P98160 AC018644.1-201ENST00000429934 551 ntBASIC2.98□□□□□ -1.93
HSPG2P98160 RPS17P8-201ENST00000434525 335 ntBASIC2.98□□□□□ -1.93
HSPG2P98160 AC053481.1-201ENST00000467217 306 ntBASIC2.98□□□□□ -1.93
HSPG2P98160 RN7SL189P-201ENST00000468631 289 ntBASIC2.98□□□□□ -1.93
HSPG2P98160 AC096754.1-201ENST00000508904 818 ntBASIC2.98□□□□□ -1.93
HSPG2P98160 AL049839.1-201ENST00000556151 657 ntBASIC2.98□□□□□ -1.93
HSPG2P98160 U1.25-201ENST00000614085 162 ntBASIC2.98□□□□□ -1.93
HSPG2P98160 U1.34-201ENST00000618578 162 ntBASIC2.98□□□□□ -1.93
HSPG2P98160 U1.31-201ENST00000620022 160 ntBASIC2.98□□□□□ -1.93
HSPG2P98160 AC011815.3-201ENST00000624194 473 ntBASIC2.98□□□□□ -1.93
HSPG2P98160 AC090506.2-201ENST00000624521 419 ntBASIC2.98□□□□□ -1.93
HSPG2P98160 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC2.98□□□□□ -1.93
HSPG2P98160 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
HSPG2P98160 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HSPG2P98160 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC2.98□□□□□ -1.93
HSPG2P98160 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC2.98□□□□□ -1.93
HSPG2P98160 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC2.98□□□□□ -1.93
HSPG2P98160 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC2.98□□□□□ -1.93
HSPG2P98160 RNF152-201ENST00000312828 9501 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
HSPG2P98160 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
HSPG2P98160 AL451142.1-201ENST00000375867 775 ntBASIC2.98□□□□□ -1.93
HSPG2P98160 GLUD1P9-201ENST00000420997 1173 ntBASIC2.98□□□□□ -1.93
HSPG2P98160 IGKV1OR9-1-201ENST00000424370 284 ntBASIC2.98□□□□□ -1.93
HSPG2P98160 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.98□□□□□ -1.93
HSPG2P98160 AL157884.3-201ENST00000448273 1184 ntBASIC2.98□□□□□ -1.93
HSPG2P98160 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC2.98□□□□□ -1.93
HSPG2P98160 RPS24P16-201ENST00000497294 392 ntBASIC2.98□□□□□ -1.93
HSPG2P98160 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC2.98□□□□□ -1.93
HSPG2P98160 HNRNPCP4-201ENST00000571636 900 ntBASIC2.98□□□□□ -1.93
HSPG2P98160 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HSPG2P98160 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
HSPG2P98160 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HSPG2P98160 CREB3L2-201ENST00000330387 7412 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HSPG2P98160 PTPN3-204ENST00000446349 8630 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HSPG2P98160 CARF-203ENST00000414439 2099 ntTSL 2 BASIC2.98□□□□□ -1.93
HSPG2P98160 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HSPG2P98160 PIEZO2-203ENST00000503781 8259 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
HSPG2P98160 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC2.98□□□□□ -1.93
HSPG2P98160 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC2.98□□□□□ -1.93
HSPG2P98160 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC2.98□□□□□ -1.93
HSPG2P98160 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
HSPG2P98160 AC114755.2-201ENST00000413520 361 ntBASIC2.98□□□□□ -1.93
HSPG2P98160 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC2.98□□□□□ -1.93
HSPG2P98160 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC2.98□□□□□ -1.93
HSPG2P98160 CASP1-216ENST00000534497 825 ntTSL 5 BASIC2.98□□□□□ -1.93
HSPG2P98160 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.98□□□□□ -1.93
HSPG2P98160 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC2.98□□□□□ -1.93
HSPG2P98160 MIR5699-201ENST00000578903 90 ntBASIC2.98□□□□□ -1.93
HSPG2P98160 AL121890.2-201ENST00000617644 465 ntBASIC2.98□□□□□ -1.93
HSPG2P98160 AC015722.2-201ENST00000622210 551 ntBASIC2.98□□□□□ -1.93
HSPG2P98160 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HSPG2P98160 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
HSPG2P98160 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC2.98□□□□□ -1.93
HSPG2P98160 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC2.98□□□□□ -1.93
HSPG2P98160 AP000547.3-204ENST00000588548 2523 ntBASIC2.98□□□□□ -1.93
HSPG2P98160 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
HSPG2P98160 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HSPG2P98160 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
HSPG2P98160 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HSPG2P98160 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC2.98□□□□□ -1.93
HSPG2P98160 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HSPG2P98160 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HSPG2P98160 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
HSPG2P98160 AC126323.6-202ENST00000568092 3511 ntBASIC2.98□□□□□ -1.93
HSPG2P98160 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
HSPG2P98160 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HSPG2P98160 U3.10-201ENST00000364459 214 ntBASIC2.98□□□□□ -1.93
HSPG2P98160 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC2.98□□□□□ -1.93
HSPG2P98160 RPL36AP41-201ENST00000493820 306 ntBASIC2.98□□□□□ -1.93
HSPG2P98160 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC2.98□□□□□ -1.93
HSPG2P98160 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC2.98□□□□□ -1.93
HSPG2P98160 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC2.98□□□□□ -1.93
HSPG2P98160 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC2.98□□□□□ -1.93
HSPG2P98160 BNIP3P35-201ENST00000604530 490 ntBASIC2.98□□□□□ -1.93
HSPG2P98160 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC2.98□□□□□ -1.93
HSPG2P98160 AC021422.1-201ENST00000621212 473 ntBASIC2.98□□□□□ -1.93
HSPG2P98160 RNF123-214ENST00000629802 207 ntTSL 5 BASIC2.98□□□□□ -1.93
HSPG2P98160 AFAP1-AS1-201ENST00000608442 6795 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HSPG2P98160 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC2.98□□□□□ -1.93
HSPG2P98160 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HSPG2P98160 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC2.97□□□□□ -1.93
HSPG2P98160 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms