Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
RAE1P78406 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RAE1P78406 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
RAE1P78406 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RAE1P78406 RNA5SP433-201ENST00000364491 114 ntBASIC5.38□□□□□ -1.55
RAE1P78406 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.38□□□□□ -1.55
RAE1P78406 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
RAE1P78406 OR7E101P-201ENST00000400428 513 ntBASIC5.38□□□□□ -1.55
RAE1P78406 AL603865.2-201ENST00000401679 213 ntBASIC5.38□□□□□ -1.55
RAE1P78406 RPS6P23-201ENST00000413224 722 ntBASIC5.38□□□□□ -1.55
RAE1P78406 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.38□□□□□ -1.55
RAE1P78406 RNF10P1-201ENST00000418589 369 ntBASIC5.38□□□□□ -1.55
RAE1P78406 MTCO2P21-201ENST00000419780 677 ntBASIC5.38□□□□□ -1.55
RAE1P78406 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.38□□□□□ -1.55
RAE1P78406 AC005005.2-201ENST00000420779 380 ntBASIC5.38□□□□□ -1.55
RAE1P78406 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.38□□□□□ -1.55
RAE1P78406 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.38□□□□□ -1.55
RAE1P78406 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.38□□□□□ -1.55
RAE1P78406 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.38□□□□□ -1.55
RAE1P78406 TMEM183AP1-205ENST00000432739 290 ntBASIC5.38□□□□□ -1.55
RAE1P78406 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.38□□□□□ -1.55
RAE1P78406 Z73417.1-201ENST00000447373 778 ntBASIC5.38□□□□□ -1.55
RAE1P78406 CALM1P2-201ENST00000452941 448 ntBASIC5.38□□□□□ -1.55
RAE1P78406 AC239798.3-201ENST00000454459 408 ntBASIC5.38□□□□□ -1.55
RAE1P78406 AC092155.2-201ENST00000454675 477 ntBASIC5.38□□□□□ -1.55
RAE1P78406 AC093166.2-201ENST00000455969 1017 ntBASIC5.38□□□□□ -1.55
RAE1P78406 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.38□□□□□ -1.55
RAE1P78406 RPS23P6-201ENST00000466136 431 ntBASIC5.38□□□□□ -1.55
RAE1P78406 NENFP3-201ENST00000503735 313 ntBASIC5.38□□□□□ -1.55
RAE1P78406 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.38□□□□□ -1.55
RAE1P78406 AC113420.1-201ENST00000507903 571 ntBASIC5.38□□□□□ -1.55
RAE1P78406 DUTP7-201ENST00000507982 486 ntBASIC5.38□□□□□ -1.55
RAE1P78406 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.38□□□□□ -1.55
RAE1P78406 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RAE1P78406 AC060775.1-201ENST00000518241 520 ntBASIC5.38□□□□□ -1.55
RAE1P78406 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.38□□□□□ -1.55
RAE1P78406 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.38□□□□□ -1.55
RAE1P78406 AP001636.2-201ENST00000525517 696 ntBASIC5.38□□□□□ -1.55
RAE1P78406 AC087888.1-201ENST00000550884 1254 ntBASIC5.38□□□□□ -1.55
RAE1P78406 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.38□□□□□ -1.55
RAE1P78406 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
RAE1P78406 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
RAE1P78406 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.38□□□□□ -1.55
RAE1P78406 MIR4789-201ENST00000577469 82 ntBASIC5.38□□□□□ -1.55
RAE1P78406 RN7SL622P-201ENST00000585292 275 ntBASIC5.38□□□□□ -1.55
RAE1P78406 NIFKP6-201ENST00000598115 845 ntBASIC5.38□□□□□ -1.55
RAE1P78406 AC002487.1-201ENST00000604565 994 ntBASIC5.38□□□□□ -1.55
RAE1P78406 AC090607.5-201ENST00000615692 224 ntBASIC5.38□□□□□ -1.55
RAE1P78406 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC5.38□□□□□ -1.55
RAE1P78406 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.38□□□□□ -1.55
RAE1P78406 AC129778.1-202ENST00000623812 261 ntBASIC5.38□□□□□ -1.55
RAE1P78406 AL591379.1-207ENST00000635982 261 ntBASIC5.38□□□□□ -1.55
RAE1P78406 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.38□□□□□ -1.55
RAE1P78406 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.38□□□□□ -1.55
RAE1P78406 AP001153.1-201ENST00000641024 338 ntBASIC5.38□□□□□ -1.55
RAE1P78406 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RAE1P78406 AC239868.2-201ENST00000564237 4527 ntBASIC5.38□□□□□ -1.55
RAE1P78406 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.38□□□□□ -1.55
RAE1P78406 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
RAE1P78406 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
RAE1P78406 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
RAE1P78406 MFSD8-220ENST00000641243 1422 ntBASIC5.38□□□□□ -1.55
RAE1P78406 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RAE1P78406 OR4F13P-202ENST00000560066 2054 ntBASIC5.38□□□□□ -1.55
RAE1P78406 ZNF849P-201ENST00000594711 1566 ntBASIC5.38□□□□□ -1.55
RAE1P78406 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RAE1P78406 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.37□□□□□ -1.55
RAE1P78406 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.37□□□□□ -1.55
RAE1P78406 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
RAE1P78406 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RAE1P78406 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.37□□□□□ -1.55
RAE1P78406 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
RAE1P78406 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RAE1P78406 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RAE1P78406 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RAE1P78406 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
RAE1P78406 MT-TP-201ENST00000387461 68 ntBASIC5.37□□□□□ -1.55
RAE1P78406 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
RAE1P78406 OR7E156P-201ENST00000400303 464 ntBASIC5.37□□□□□ -1.55
RAE1P78406 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.37□□□□□ -1.55
RAE1P78406 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RAE1P78406 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.37□□□□□ -1.55
RAE1P78406 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.37□□□□□ -1.55
RAE1P78406 AC127526.2-201ENST00000426436 775 ntBASIC5.37□□□□□ -1.55
RAE1P78406 RPL12P28-201ENST00000430852 489 ntBASIC5.37□□□□□ -1.55
RAE1P78406 HMGB3P24-201ENST00000433260 622 ntBASIC5.37□□□□□ -1.55
RAE1P78406 MTCYBP31-201ENST00000438855 1122 ntBASIC5.37□□□□□ -1.55
RAE1P78406 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.37□□□□□ -1.55
RAE1P78406 VN1R25P-201ENST00000443385 738 ntBASIC5.37□□□□□ -1.55
RAE1P78406 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
RAE1P78406 AL596266.1-201ENST00000448132 400 ntBASIC5.37□□□□□ -1.55
RAE1P78406 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.37□□□□□ -1.55
RAE1P78406 HLA-DPA3-207ENST00000454398 229 ntBASIC5.37□□□□□ -1.55
RAE1P78406 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.37□□□□□ -1.55
RAE1P78406 AC002075.1-201ENST00000457396 676 ntBASIC5.37□□□□□ -1.55
RAE1P78406 RN7SL168P-201ENST00000463821 279 ntBASIC5.37□□□□□ -1.55
RAE1P78406 RPL6P9-201ENST00000466502 859 ntBASIC5.37□□□□□ -1.55
RAE1P78406 RPL21P131-201ENST00000497298 483 ntBASIC5.37□□□□□ -1.55
RAE1P78406 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC5.37□□□□□ -1.55
RAE1P78406 AC005351.1-201ENST00000511152 786 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms