Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.54□□□□□ -1.68
UBA52P62987 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.54□□□□□ -1.68
UBA52P62987 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.54□□□□□ -1.68
UBA52P62987 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
UBA52P62987 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
UBA52P62987 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
UBA52P62987 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.54□□□□□ -1.68
UBA52P62987 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
UBA52P62987 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
UBA52P62987 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
UBA52P62987 RBPJP2-201ENST00000618187 1444 ntBASIC4.54□□□□□ -1.68
UBA52P62987 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.53□□□□□ -1.68
UBA52P62987 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
UBA52P62987 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
UBA52P62987 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
UBA52P62987 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
UBA52P62987 AL034370.1-201ENST00000397254 1590 ntBASIC4.53□□□□□ -1.68
UBA52P62987 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
UBA52P62987 AC068870.1-201ENST00000563737 2455 ntBASIC4.53□□□□□ -1.68
UBA52P62987 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
UBA52P62987 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
UBA52P62987 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
UBA52P62987 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
UBA52P62987 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
UBA52P62987 RNA5SP183-201ENST00000362452 119 ntBASIC4.53□□□□□ -1.68
UBA52P62987 RNA5SP30-201ENST00000365552 115 ntBASIC4.53□□□□□ -1.68
UBA52P62987 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.53□□□□□ -1.68
UBA52P62987 AL133270.1-201ENST00000402635 279 ntBASIC4.53□□□□□ -1.68
UBA52P62987 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.53□□□□□ -1.68
UBA52P62987 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.53□□□□□ -1.68
UBA52P62987 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.53□□□□□ -1.68
UBA52P62987 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.53□□□□□ -1.68
UBA52P62987 AC092447.2-201ENST00000435487 669 ntBASIC4.53□□□□□ -1.68
UBA52P62987 RPL12P3-201ENST00000440080 396 ntBASIC4.53□□□□□ -1.68
UBA52P62987 AC019185.1-201ENST00000442718 389 ntBASIC4.53□□□□□ -1.68
UBA52P62987 AZGP1P2-201ENST00000454506 345 ntBASIC4.53□□□□□ -1.68
UBA52P62987 RPSAP50-201ENST00000481955 852 ntBASIC4.53□□□□□ -1.68
UBA52P62987 OR11I1P-201ENST00000486033 954 ntBASIC4.53□□□□□ -1.68
UBA52P62987 AC072052.1-201ENST00000496556 306 ntBASIC4.53□□□□□ -1.68
UBA52P62987 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.53□□□□□ -1.68
UBA52P62987 RNA5SP464-201ENST00000516251 108 ntBASIC4.53□□□□□ -1.68
UBA52P62987 RN7SKP99-201ENST00000517028 307 ntBASIC4.53□□□□□ -1.68
UBA52P62987 OR10D4P-201ENST00000525892 951 ntBASIC4.53□□□□□ -1.68
UBA52P62987 OR4A46P-201ENST00000527255 933 ntBASIC4.53□□□□□ -1.68
UBA52P62987 EIF4A2P5-201ENST00000529914 499 ntBASIC4.53□□□□□ -1.68
UBA52P62987 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.53□□□□□ -1.68
UBA52P62987 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.53□□□□□ -1.68
UBA52P62987 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.53□□□□□ -1.68
UBA52P62987 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.53□□□□□ -1.68
UBA52P62987 BX005214.3-202ENST00000619809 325 ntBASIC4.53□□□□□ -1.68
UBA52P62987 AC068870.2-201ENST00000620635 389 ntBASIC4.53□□□□□ -1.68
UBA52P62987 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.53□□□□□ -1.68
UBA52P62987 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
UBA52P62987 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
UBA52P62987 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
UBA52P62987 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
UBA52P62987 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
UBA52P62987 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
UBA52P62987 MAPK10-286ENST00000641208 8747 ntBASIC4.52□□□□□ -1.69
UBA52P62987 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.52□□□□□ -1.69
UBA52P62987 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
UBA52P62987 RNU1-77P-201ENST00000390868 162 ntBASIC4.52□□□□□ -1.69
UBA52P62987 RN7SKP273-201ENST00000411392 314 ntBASIC4.52□□□□□ -1.69
UBA52P62987 NENFP1-201ENST00000419476 466 ntBASIC4.52□□□□□ -1.69
UBA52P62987 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
UBA52P62987 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.52□□□□□ -1.69
UBA52P62987 FAR2P1-206ENST00000449736 709 ntBASIC4.52□□□□□ -1.69
UBA52P62987 VDAC2P4-201ENST00000452925 711 ntBASIC4.52□□□□□ -1.69
UBA52P62987 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.52□□□□□ -1.69
UBA52P62987 AC022795.1-201ENST00000473808 480 ntBASIC4.52□□□□□ -1.69
UBA52P62987 RPS21P4-201ENST00000487122 248 ntBASIC4.52□□□□□ -1.69
UBA52P62987 AC073610.1-201ENST00000489971 396 ntBASIC4.52□□□□□ -1.69
UBA52P62987 RN7SL808P-201ENST00000496066 299 ntBASIC4.52□□□□□ -1.69
UBA52P62987 RPS24P16-201ENST00000497294 392 ntBASIC4.52□□□□□ -1.69
UBA52P62987 NIFKP7-201ENST00000503365 834 ntBASIC4.52□□□□□ -1.69
UBA52P62987 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.52□□□□□ -1.69
UBA52P62987 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.52□□□□□ -1.69
UBA52P62987 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.52□□□□□ -1.69
UBA52P62987 AGGF1P7-201ENST00000562369 913 ntBASIC4.52□□□□□ -1.69
UBA52P62987 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.52□□□□□ -1.69
UBA52P62987 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.52□□□□□ -1.69
UBA52P62987 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.52□□□□□ -1.69
UBA52P62987 TAS2R6P-201ENST00000605022 826 ntBASIC4.52□□□□□ -1.69
UBA52P62987 AL445222.1-201ENST00000607259 628 ntBASIC4.52□□□□□ -1.69
UBA52P62987 AC025574.2-201ENST00000615621 514 ntBASIC4.52□□□□□ -1.69
UBA52P62987 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.52□□□□□ -1.69
UBA52P62987 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
UBA52P62987 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
UBA52P62987 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
UBA52P62987 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.52□□□□□ -1.69
UBA52P62987 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
UBA52P62987 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.52□□□□□ -1.69
UBA52P62987 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.52□□□□□ -1.69
UBA52P62987 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.51□□□□□ -1.69
UBA52P62987 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
UBA52P62987 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.51□□□□□ -1.69
UBA52P62987 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
UBA52P62987 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
UBA52P62987 AC005294.1-201ENST00000355509 281 ntBASIC4.51□□□□□ -1.69
UBA52P62987 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms