Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.74□□□□□ -1.49
HDAC4P56524 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.74□□□□□ -1.49
HDAC4P56524 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.74□□□□□ -1.49
HDAC4P56524 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.74□□□□□ -1.49
HDAC4P56524 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.74□□□□□ -1.49
HDAC4P56524 CR788268.1-201ENST00000603931 1809 ntBASIC5.74□□□□□ -1.49
HDAC4P56524 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
HDAC4P56524 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
HDAC4P56524 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HDAC4P56524 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
HDAC4P56524 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HDAC4P56524 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HDAC4P56524 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HDAC4P56524 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HDAC4P56524 RN7SKP28-201ENST00000364770 305 ntBASIC5.74□□□□□ -1.49
HDAC4P56524 RN7SKP6-201ENST00000364795 319 ntBASIC5.74□□□□□ -1.49
HDAC4P56524 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.74□□□□□ -1.49
HDAC4P56524 MIR551A-201ENST00000385042 96 ntBASIC5.74□□□□□ -1.49
HDAC4P56524 MIR137-201ENST00000385223 102 ntBASIC5.74□□□□□ -1.49
HDAC4P56524 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
HDAC4P56524 RN7SKP286-201ENST00000410894 299 ntBASIC5.74□□□□□ -1.49
HDAC4P56524 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.74□□□□□ -1.49
HDAC4P56524 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.74□□□□□ -1.49
HDAC4P56524 NPM1P22-201ENST00000427761 952 ntBASIC5.74□□□□□ -1.49
HDAC4P56524 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.74□□□□□ -1.49
HDAC4P56524 AC073909.1-201ENST00000447112 999 ntBASIC5.74□□□□□ -1.49
HDAC4P56524 RPS27AP2-201ENST00000457576 465 ntBASIC5.74□□□□□ -1.49
HDAC4P56524 RN7SL197P-201ENST00000466981 299 ntBASIC5.74□□□□□ -1.49
HDAC4P56524 STRADBP1-201ENST00000478954 1281 ntBASIC5.74□□□□□ -1.49
HDAC4P56524 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.74□□□□□ -1.49
HDAC4P56524 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.74□□□□□ -1.49
HDAC4P56524 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.74□□□□□ -1.49
HDAC4P56524 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HDAC4P56524 AC106806.2-201ENST00000509365 500 ntBASIC5.74□□□□□ -1.49
HDAC4P56524 AC091912.1-201ENST00000511351 248 ntBASIC5.74□□□□□ -1.49
HDAC4P56524 AL671862.1-201ENST00000515851 349 ntBASIC5.74□□□□□ -1.49
HDAC4P56524 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.74□□□□□ -1.49
HDAC4P56524 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.74□□□□□ -1.49
HDAC4P56524 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HDAC4P56524 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC5.74□□□□□ -1.49
HDAC4P56524 AC008147.3-201ENST00000548666 354 ntBASIC5.74□□□□□ -1.49
HDAC4P56524 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.74□□□□□ -1.49
HDAC4P56524 DPRXP4-201ENST00000578053 568 ntBASIC5.74□□□□□ -1.49
HDAC4P56524 MIR1273E-201ENST00000581165 102 ntBASIC5.74□□□□□ -1.49
HDAC4P56524 AC026790.2-201ENST00000606282 430 ntBASIC5.74□□□□□ -1.49
HDAC4P56524 MIR6133-201ENST00000617057 108 ntBASIC5.74□□□□□ -1.49
HDAC4P56524 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HDAC4P56524 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HDAC4P56524 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.74□□□□□ -1.49
HDAC4P56524 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
HDAC4P56524 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.74□□□□□ -1.49
HDAC4P56524 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.74□□□□□ -1.49
HDAC4P56524 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.74□□□□□ -1.49
HDAC4P56524 AC053481.2-202ENST00000582394 1500 ntBASIC5.74□□□□□ -1.49
HDAC4P56524 DDX6P1-205ENST00000441966 1436 ntBASIC5.74□□□□□ -1.49
HDAC4P56524 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.73□□□□□ -1.49
HDAC4P56524 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HDAC4P56524 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.73□□□□□ -1.49
HDAC4P56524 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
HDAC4P56524 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HDAC4P56524 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.73□□□□□ -1.49
HDAC4P56524 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.73□□□□□ -1.49
HDAC4P56524 AC079097.1-201ENST00000512187 1399 ntBASIC5.73□□□□□ -1.49
HDAC4P56524 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.73□□□□□ -1.49
HDAC4P56524 AC010132.2-201ENST00000295493 1043 ntBASIC5.73□□□□□ -1.49
HDAC4P56524 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
HDAC4P56524 MIR421-201ENST00000365696 85 ntBASIC5.73□□□□□ -1.49
HDAC4P56524 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
HDAC4P56524 RNU6-1320P-201ENST00000390838 107 ntBASIC5.73□□□□□ -1.49
HDAC4P56524 RNU6-1269P-201ENST00000391139 107 ntBASIC5.73□□□□□ -1.49
HDAC4P56524 GAPDHP15-201ENST00000398586 975 ntBASIC5.73□□□□□ -1.49
HDAC4P56524 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.73□□□□□ -1.49
HDAC4P56524 BMS1P13-201ENST00000417301 885 ntBASIC5.73□□□□□ -1.49
HDAC4P56524 OR6C64P-201ENST00000419708 825 ntBASIC5.73□□□□□ -1.49
HDAC4P56524 TNPO1P1-201ENST00000423641 1138 ntBASIC5.73□□□□□ -1.49
HDAC4P56524 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.73□□□□□ -1.49
HDAC4P56524 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC5.73□□□□□ -1.49
HDAC4P56524 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.73□□□□□ -1.49
HDAC4P56524 AC073465.2-201ENST00000440938 498 ntBASIC5.73□□□□□ -1.49
HDAC4P56524 AC023271.1-201ENST00000445936 1090 ntBASIC5.73□□□□□ -1.49
HDAC4P56524 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.73□□□□□ -1.49
HDAC4P56524 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.73□□□□□ -1.49
HDAC4P56524 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.73□□□□□ -1.49
HDAC4P56524 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.73□□□□□ -1.49
HDAC4P56524 RNU6-599P-201ENST00000459383 107 ntBASIC5.73□□□□□ -1.49
HDAC4P56524 RNU6-1193P-201ENST00000459461 107 ntBASIC5.73□□□□□ -1.49
HDAC4P56524 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.73□□□□□ -1.49
HDAC4P56524 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.73□□□□□ -1.49
HDAC4P56524 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.73□□□□□ -1.49
HDAC4P56524 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.73□□□□□ -1.49
HDAC4P56524 AC027544.3-201ENST00000535082 757 ntBASIC5.73□□□□□ -1.49
HDAC4P56524 AC134349.2-201ENST00000535136 910 ntBASIC5.73□□□□□ -1.49
HDAC4P56524 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
HDAC4P56524 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC5.73□□□□□ -1.49
HDAC4P56524 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.73□□□□□ -1.49
HDAC4P56524 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
HDAC4P56524 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.73□□□□□ -1.49
HDAC4P56524 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC5.73□□□□□ -1.49
HDAC4P56524 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.73□□□□□ -1.49
HDAC4P56524 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms