Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CX3CR1P49238 RLIMP2-201ENST00000427891 1563 ntBASIC4.6□□□□□ -1.67
CX3CR1P49238 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CX3CR1P49238 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
CX3CR1P49238 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
CX3CR1P49238 AL731532.2-201ENST00000623542 1953 ntBASIC4.6□□□□□ -1.67
CX3CR1P49238 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CX3CR1P49238 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CX3CR1P49238 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CX3CR1P49238 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CX3CR1P49238 AC005294.1-201ENST00000355509 281 ntBASIC4.59□□□□□ -1.67
CX3CR1P49238 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CX3CR1P49238 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CX3CR1P49238 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CX3CR1P49238 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.59□□□□□ -1.67
CX3CR1P49238 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CX3CR1P49238 RNU1-77P-201ENST00000390868 162 ntBASIC4.59□□□□□ -1.67
CX3CR1P49238 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
CX3CR1P49238 AC007738.1-201ENST00000413892 348 ntBASIC4.59□□□□□ -1.67
CX3CR1P49238 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
CX3CR1P49238 OR51A6P-201ENST00000418680 1004 ntBASIC4.59□□□□□ -1.67
CX3CR1P49238 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.59□□□□□ -1.67
CX3CR1P49238 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.59□□□□□ -1.67
CX3CR1P49238 HSPE1P16-201ENST00000426640 348 ntBASIC4.59□□□□□ -1.67
CX3CR1P49238 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.59□□□□□ -1.67
CX3CR1P49238 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.59□□□□□ -1.67
CX3CR1P49238 AL161722.2-201ENST00000434731 981 ntBASIC4.59□□□□□ -1.67
CX3CR1P49238 AC046176.1-201ENST00000435260 1170 ntBASIC4.59□□□□□ -1.67
CX3CR1P49238 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.59□□□□□ -1.67
CX3CR1P49238 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
CX3CR1P49238 AL157385.1-201ENST00000446973 268 ntBASIC4.59□□□□□ -1.67
CX3CR1P49238 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC4.59□□□□□ -1.67
CX3CR1P49238 TPT1P1-201ENST00000458495 518 ntBASIC4.59□□□□□ -1.67
CX3CR1P49238 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.59□□□□□ -1.67
CX3CR1P49238 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CX3CR1P49238 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CX3CR1P49238 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.59□□□□□ -1.67
CX3CR1P49238 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.59□□□□□ -1.67
CX3CR1P49238 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.59□□□□□ -1.67
CX3CR1P49238 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
CX3CR1P49238 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.59□□□□□ -1.67
CX3CR1P49238 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.59□□□□□ -1.67
CX3CR1P49238 AC122134.1-201ENST00000565664 1104 ntBASIC4.59□□□□□ -1.67
CX3CR1P49238 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CX3CR1P49238 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.59□□□□□ -1.67
CX3CR1P49238 AC010615.3-201ENST00000597319 394 ntBASIC4.59□□□□□ -1.67
CX3CR1P49238 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.59□□□□□ -1.67
CX3CR1P49238 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.59□□□□□ -1.67
CX3CR1P49238 AL135786.2-201ENST00000608422 615 ntBASIC4.59□□□□□ -1.67
CX3CR1P49238 RBPJP2-201ENST00000618187 1444 ntBASIC4.59□□□□□ -1.67
CX3CR1P49238 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.59□□□□□ -1.67
CX3CR1P49238 AC104260.2-201ENST00000623551 3497 ntBASIC4.59□□□□□ -1.67
CX3CR1P49238 MTCO1P1-201ENST00000624263 1081 ntBASIC4.59□□□□□ -1.67
CX3CR1P49238 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.59□□□□□ -1.67
CX3CR1P49238 AC074101.1-201ENST00000637861 241 ntBASIC4.59□□□□□ -1.67
CX3CR1P49238 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CX3CR1P49238 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CX3CR1P49238 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CX3CR1P49238 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
CX3CR1P49238 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
CX3CR1P49238 AP001642.1-201ENST00000624727 2117 ntBASIC4.58□□□□□ -1.68
CX3CR1P49238 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.58□□□□□ -1.68
CX3CR1P49238 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CX3CR1P49238 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CX3CR1P49238 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CX3CR1P49238 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CX3CR1P49238 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CX3CR1P49238 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.58□□□□□ -1.68
CX3CR1P49238 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CX3CR1P49238 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CX3CR1P49238 Y_RNA.62-201ENST00000362840 99 ntBASIC4.58□□□□□ -1.68
CX3CR1P49238 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.58□□□□□ -1.68
CX3CR1P49238 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.58□□□□□ -1.68
CX3CR1P49238 RPL10P10-201ENST00000403509 664 ntBASIC4.58□□□□□ -1.68
CX3CR1P49238 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.58□□□□□ -1.68
CX3CR1P49238 AL133325.1-201ENST00000421090 382 ntBASIC4.58□□□□□ -1.68
CX3CR1P49238 AC104333.2-201ENST00000422630 192 ntBASIC4.58□□□□□ -1.68
CX3CR1P49238 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.58□□□□□ -1.68
CX3CR1P49238 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.58□□□□□ -1.68
CX3CR1P49238 RPL34P6-201ENST00000432390 345 ntBASIC4.58□□□□□ -1.68
CX3CR1P49238 CYCSP6-201ENST00000434498 302 ntBASIC4.58□□□□□ -1.68
CX3CR1P49238 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.58□□□□□ -1.68
CX3CR1P49238 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.58□□□□□ -1.68
CX3CR1P49238 AP000281.1-201ENST00000444036 316 ntBASIC4.58□□□□□ -1.68
CX3CR1P49238 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.58□□□□□ -1.68
CX3CR1P49238 MTND4LP12-201ENST00000448237 295 ntBASIC4.58□□□□□ -1.68
CX3CR1P49238 OR6C72P-201ENST00000451403 892 ntBASIC4.58□□□□□ -1.68
CX3CR1P49238 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CX3CR1P49238 RNA5SP103-201ENST00000459503 118 ntBASIC4.58□□□□□ -1.68
CX3CR1P49238 AC108161.1-201ENST00000461060 402 ntBASIC4.58□□□□□ -1.68
CX3CR1P49238 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.58□□□□□ -1.68
CX3CR1P49238 PPIAP19-201ENST00000486414 492 ntBASIC4.58□□□□□ -1.68
CX3CR1P49238 RN7SL466P-201ENST00000497546 295 ntBASIC4.58□□□□□ -1.68
CX3CR1P49238 RPEP1-201ENST00000504507 658 ntBASIC4.58□□□□□ -1.68
CX3CR1P49238 AC006427.1-201ENST00000514359 712 ntBASIC4.58□□□□□ -1.68
CX3CR1P49238 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.58□□□□□ -1.68
CX3CR1P49238 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CX3CR1P49238 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.58□□□□□ -1.68
CX3CR1P49238 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CX3CR1P49238 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms