Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
HTTP42858 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
HTTP42858 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HTTP42858 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
HTTP42858 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.3□□□□□ -1.56
HTTP42858 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HTTP42858 GIGYF2-205ENST00000409547 5978 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HTTP42858 AL590762.2-201ENST00000395798 571 ntBASIC5.3□□□□□ -1.56
HTTP42858 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.3□□□□□ -1.56
HTTP42858 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HTTP42858 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.3□□□□□ -1.56
HTTP42858 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
HTTP42858 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
HTTP42858 MITF-203ENST00000328528 4680 ntTSL 5 BASIC5.3□□□□□ -1.56
HTTP42858 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
HTTP42858 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
HTTP42858 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.3□□□□□ -1.56
HTTP42858 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.3□□□□□ -1.56
HTTP42858 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HTTP42858 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
HTTP42858 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HTTP42858 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
HTTP42858 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HTTP42858 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
HTTP42858 SORBS2-201ENST00000284776 5996 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HTTP42858 RNA5SP283-201ENST00000365604 119 ntBASIC5.3□□□□□ -1.56
HTTP42858 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
HTTP42858 MIR449B-201ENST00000384995 97 ntBASIC5.3□□□□□ -1.56
HTTP42858 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.3□□□□□ -1.56
HTTP42858 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.3□□□□□ -1.56
HTTP42858 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.3□□□□□ -1.56
HTTP42858 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.3□□□□□ -1.56
HTTP42858 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.3□□□□□ -1.56
HTTP42858 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.3□□□□□ -1.56
HTTP42858 AC069542.2-201ENST00000624816 216 ntBASIC5.3□□□□□ -1.56
HTTP42858 NAIP-204ENST00000503719 5347 ntTSL 5 BASIC5.3□□□□□ -1.56
HTTP42858 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.3□□□□□ -1.56
HTTP42858 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
HTTP42858 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HTTP42858 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HTTP42858 AC015813.3-201ENST00000584805 6113 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HTTP42858 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
HTTP42858 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
HTTP42858 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.29□□□□□ -1.56
HTTP42858 AC009238.2-201ENST00000431026 355 ntBASIC5.29□□□□□ -1.56
HTTP42858 RN7SL691P-201ENST00000494487 301 ntBASIC5.29□□□□□ -1.56
HTTP42858 AC006499.6-201ENST00000511169 607 ntBASIC5.29□□□□□ -1.56
HTTP42858 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.29□□□□□ -1.56
HTTP42858 AL356863.1-201ENST00000623378 1080 ntBASIC5.29□□□□□ -1.56
HTTP42858 AL450345.1-202ENST00000605741 3881 ntBASIC5.29□□□□□ -1.56
HTTP42858 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HTTP42858 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.29□□□□□ -1.56
HTTP42858 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HTTP42858 B4GALNT2-202ENST00000393354 8657 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HTTP42858 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.29□□□□□ -1.56
HTTP42858 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HTTP42858 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HTTP42858 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.29□□□□□ -1.56
HTTP42858 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HTTP42858 RN7SKP33-201ENST00000410942 340 ntBASIC5.29□□□□□ -1.56
HTTP42858 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HTTP42858 CYCSP10-201ENST00000417973 294 ntBASIC5.29□□□□□ -1.56
HTTP42858 RPL7AP25-201ENST00000423357 805 ntBASIC5.29□□□□□ -1.56
HTTP42858 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HTTP42858 AC108359.1-201ENST00000616451 1211 ntBASIC5.29□□□□□ -1.56
HTTP42858 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HTTP42858 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HTTP42858 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HTTP42858 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HTTP42858 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HTTP42858 ARHGEF11-202ENST00000368194 6889 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
HTTP42858 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.28□□□□□ -1.56
HTTP42858 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HTTP42858 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
HTTP42858 RPS27AP11-201ENST00000402798 447 ntBASIC5.28□□□□□ -1.56
HTTP42858 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.28□□□□□ -1.56
HTTP42858 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.28□□□□□ -1.56
HTTP42858 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.28□□□□□ -1.56
HTTP42858 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.28□□□□□ -1.56
HTTP42858 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.28□□□□□ -1.56
HTTP42858 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.28□□□□□ -1.56
HTTP42858 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HTTP42858 BCOR-205ENST00000397354 6258 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
HTTP42858 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HTTP42858 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
HTTP42858 OR14L1P-202ENST00000641545 3009 ntBASIC5.28□□□□□ -1.56
HTTP42858 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC5.28□□□□□ -1.56
HTTP42858 ERG-203ENST00000398905 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
HTTP42858 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
HTTP42858 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HTTP42858 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HTTP42858 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.28□□□□□ -1.56
HTTP42858 AC025574.1-201ENST00000554784 1653 ntBASIC5.28□□□□□ -1.56
HTTP42858 RN7SKP153-201ENST00000365026 316 ntBASIC5.28□□□□□ -1.56
HTTP42858 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.28□□□□□ -1.56
HTTP42858 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.28□□□□□ -1.56
HTTP42858 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
HTTP42858 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
HTTP42858 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.28□□□□□ -1.56
HTTP42858 MIR3200-201ENST00000580767 85 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms