Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
CNGA1P29973 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CNGA1P29973 RNU5B-1-201ENST00000363286 116 ntBASIC6.72□□□□□ -1.33
CNGA1P29973 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.72□□□□□ -1.33
CNGA1P29973 RNU6-171P-201ENST00000384354 107 ntBASIC6.72□□□□□ -1.33
CNGA1P29973 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.72□□□□□ -1.33
CNGA1P29973 HMGB3P31-201ENST00000413333 595 ntBASIC6.72□□□□□ -1.33
CNGA1P29973 HMGA1P8-201ENST00000414130 321 ntBASIC6.72□□□□□ -1.33
CNGA1P29973 BMS1P17-202ENST00000416720 316 ntBASIC6.72□□□□□ -1.33
CNGA1P29973 RPS17P17-201ENST00000419392 409 ntBASIC6.72□□□□□ -1.33
CNGA1P29973 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CNGA1P29973 TNPO1P1-201ENST00000423641 1138 ntBASIC6.72□□□□□ -1.33
CNGA1P29973 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC6.72□□□□□ -1.33
CNGA1P29973 RPL34P26-201ENST00000445636 354 ntBASIC6.72□□□□□ -1.33
CNGA1P29973 AL031313.1-201ENST00000448435 256 ntBASIC6.72□□□□□ -1.33
CNGA1P29973 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.72□□□□□ -1.33
CNGA1P29973 AC037198.2-201ENST00000478845 733 ntBASIC6.72□□□□□ -1.33
CNGA1P29973 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.72□□□□□ -1.33
CNGA1P29973 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
CNGA1P29973 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC6.72□□□□□ -1.33
CNGA1P29973 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CNGA1P29973 AC147055.3-201ENST00000510547 851 ntBASIC6.72□□□□□ -1.33
CNGA1P29973 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC6.72□□□□□ -1.33
CNGA1P29973 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CNGA1P29973 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.72□□□□□ -1.33
CNGA1P29973 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC6.72□□□□□ -1.33
CNGA1P29973 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.72□□□□□ -1.33
CNGA1P29973 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.72□□□□□ -1.33
CNGA1P29973 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CNGA1P29973 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.72□□□□□ -1.33
CNGA1P29973 AC008115.3-201ENST00000614874 549 ntBASIC6.72□□□□□ -1.33
CNGA1P29973 AC011472.4-201ENST00000615848 491 ntBASIC6.72□□□□□ -1.33
CNGA1P29973 AC118658.2-201ENST00000618697 459 ntBASIC6.72□□□□□ -1.33
CNGA1P29973 AC021106.3-201ENST00000623925 531 ntBASIC6.72□□□□□ -1.33
CNGA1P29973 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CNGA1P29973 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6.72□□□□□ -1.33
CNGA1P29973 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
CNGA1P29973 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
CNGA1P29973 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.72□□□□□ -1.33
CNGA1P29973 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.72□□□□□ -1.33
CNGA1P29973 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CNGA1P29973 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
CNGA1P29973 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CNGA1P29973 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CNGA1P29973 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.72□□□□□ -1.33
CNGA1P29973 NXF4-202ENST00000416098 1465 ntBASIC6.72□□□□□ -1.33
CNGA1P29973 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.71□□□□□ -1.33
CNGA1P29973 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CNGA1P29973 HSPD1P8-201ENST00000400121 1658 ntBASIC6.71□□□□□ -1.33
CNGA1P29973 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.33
CNGA1P29973 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CNGA1P29973 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.33
CNGA1P29973 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.71□□□□□ -1.33
CNGA1P29973 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
CNGA1P29973 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CNGA1P29973 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.71□□□□□ -1.33
CNGA1P29973 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.71□□□□□ -1.34
CNGA1P29973 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.71□□□□□ -1.34
CNGA1P29973 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.71□□□□□ -1.34
CNGA1P29973 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CNGA1P29973 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC6.71□□□□□ -1.34
CNGA1P29973 MIR142-201ENST00000384835 87 ntBASIC6.71□□□□□ -1.34
CNGA1P29973 RPL5P19-201ENST00000404228 893 ntBASIC6.71□□□□□ -1.34
CNGA1P29973 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.71□□□□□ -1.34
CNGA1P29973 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.71□□□□□ -1.34
CNGA1P29973 OR6K4P-201ENST00000423179 955 ntBASIC6.71□□□□□ -1.34
CNGA1P29973 AC021876.1-201ENST00000425959 359 ntBASIC6.71□□□□□ -1.34
CNGA1P29973 DPY19L1P2-201ENST00000426647 915 ntBASIC6.71□□□□□ -1.34
CNGA1P29973 RPS27P18-201ENST00000431701 247 ntBASIC6.71□□□□□ -1.34
CNGA1P29973 MTCO1P52-201ENST00000433928 531 ntBASIC6.71□□□□□ -1.34
CNGA1P29973 AC079922.1-201ENST00000443291 359 ntBASIC6.71□□□□□ -1.34
CNGA1P29973 AL358794.1-201ENST00000445689 381 ntBASIC6.71□□□□□ -1.34
CNGA1P29973 AC092685.1-201ENST00000447960 1243 ntBASIC6.71□□□□□ -1.34
CNGA1P29973 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC6.71□□□□□ -1.34
CNGA1P29973 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.71□□□□□ -1.34
CNGA1P29973 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC6.71□□□□□ -1.34
CNGA1P29973 RPL7L1P3-201ENST00000455249 689 ntBASIC6.71□□□□□ -1.34
CNGA1P29973 AC112187.1-201ENST00000455837 479 ntBASIC6.71□□□□□ -1.34
CNGA1P29973 AC099521.1-201ENST00000482557 334 ntBASIC6.71□□□□□ -1.34
CNGA1P29973 RPS3AP6-201ENST00000484430 795 ntBASIC6.71□□□□□ -1.34
CNGA1P29973 RPS23P1-201ENST00000491662 432 ntBASIC6.71□□□□□ -1.34
CNGA1P29973 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.71□□□□□ -1.34
CNGA1P29973 HPRT1P1-201ENST00000509498 657 ntBASIC6.71□□□□□ -1.34
CNGA1P29973 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC6.71□□□□□ -1.34
CNGA1P29973 OR8G5-201ENST00000524943 1041 ntBASIC6.71□□□□□ -1.34
CNGA1P29973 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.71□□□□□ -1.34
CNGA1P29973 IGBP1P1-201ENST00000554337 1009 ntBASIC6.71□□□□□ -1.34
CNGA1P29973 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC6.71□□□□□ -1.34
CNGA1P29973 AP002906.1-201ENST00000603405 233 ntBASIC6.71□□□□□ -1.34
CNGA1P29973 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.71□□□□□ -1.34
CNGA1P29973 AL109659.3-201ENST00000624985 950 ntBASIC6.71□□□□□ -1.34
CNGA1P29973 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC6.71□□□□□ -1.34
CNGA1P29973 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CNGA1P29973 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CNGA1P29973 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.71□□□□□ -1.34
CNGA1P29973 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.71□□□□□ -1.34
CNGA1P29973 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
CNGA1P29973 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
CNGA1P29973 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
CNGA1P29973 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms