Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC7.5□□□□□ -1.21
VARSP26640 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
VARSP26640 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
VARSP26640 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
VARSP26640 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
VARSP26640 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
VARSP26640 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
VARSP26640 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
VARSP26640 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC7.5□□□□□ -1.21
VARSP26640 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
VARSP26640 OFD1P9Y-201ENST00000417699 1491 ntBASIC7.49□□□□□ -1.21
VARSP26640 Z83820.1-201ENST00000456978 1499 ntBASIC7.49□□□□□ -1.21
VARSP26640 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
VARSP26640 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
VARSP26640 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
VARSP26640 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
VARSP26640 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
VARSP26640 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7.49□□□□□ -1.21
VARSP26640 LARP1BP1-201ENST00000506036 1359 ntBASIC7.49□□□□□ -1.21
VARSP26640 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
VARSP26640 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
VARSP26640 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC7.49□□□□□ -1.21
VARSP26640 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
VARSP26640 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
VARSP26640 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
VARSP26640 CASP10-201ENST00000272879 2073 ntTSL 2 BASIC7.49□□□□□ -1.21
VARSP26640 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC7.49□□□□□ -1.21
VARSP26640 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
VARSP26640 RNU6-359P-201ENST00000365466 108 ntBASIC7.49□□□□□ -1.21
VARSP26640 Y_RNA.381-201ENST00000365666 102 ntBASIC7.49□□□□□ -1.21
VARSP26640 RNU6-639P-201ENST00000384074 107 ntBASIC7.49□□□□□ -1.21
VARSP26640 RNU6-452P-201ENST00000384406 107 ntBASIC7.49□□□□□ -1.21
VARSP26640 SNORA10B-201ENST00000384458 133 ntBASIC7.49□□□□□ -1.21
VARSP26640 RNU6-244P-201ENST00000391028 104 ntBASIC7.49□□□□□ -1.21
VARSP26640 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
VARSP26640 AL603908.1-201ENST00000406098 201 ntBASIC7.49□□□□□ -1.21
VARSP26640 NAP1L1P2-201ENST00000414182 1089 ntBASIC7.49□□□□□ -1.21
VARSP26640 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC7.49□□□□□ -1.21
VARSP26640 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC7.49□□□□□ -1.21
VARSP26640 AC011753.4-201ENST00000417974 311 ntBASIC7.49□□□□□ -1.21
VARSP26640 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC7.49□□□□□ -1.21
VARSP26640 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC7.49□□□□□ -1.21
VARSP26640 MTCYBP8-201ENST00000422855 651 ntBASIC7.49□□□□□ -1.21
VARSP26640 Z82205.1-201ENST00000428456 297 ntBASIC7.49□□□□□ -1.21
VARSP26640 AC133104.1-201ENST00000429100 218 ntBASIC7.49□□□□□ -1.21
VARSP26640 ANKRD54P1-201ENST00000433115 471 ntBASIC7.49□□□□□ -1.21
VARSP26640 AJ006995.1-201ENST00000433344 572 ntTSL 3 BASIC7.49□□□□□ -1.21
VARSP26640 GTF2IP13-201ENST00000438487 386 ntBASIC7.49□□□□□ -1.21
VARSP26640 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC7.49□□□□□ -1.21
VARSP26640 CD59-206ENST00000445143 825 ntAPPRIS P2 TSL 3 BASIC7.49□□□□□ -1.21
VARSP26640 ARL2BPP10-201ENST00000446487 531 ntBASIC7.49□□□□□ -1.21
VARSP26640 RPL7P14-201ENST00000449851 741 ntBASIC7.49□□□□□ -1.21
VARSP26640 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC7.49□□□□□ -1.21
VARSP26640 RPL18AP17-201ENST00000455326 198 ntBASIC7.49□□□□□ -1.21
VARSP26640 Y_RNA.639-201ENST00000458981 102 ntBASIC7.49□□□□□ -1.21
VARSP26640 MTCO2P29-201ENST00000465212 189 ntBASIC7.49□□□□□ -1.21
VARSP26640 RPL7P17-201ENST00000470927 724 ntBASIC7.49□□□□□ -1.21
VARSP26640 AC006387.1-203ENST00000494849 342 ntTSL 3 BASIC7.49□□□□□ -1.21
VARSP26640 RN7SL388P-201ENST00000498736 339 ntBASIC7.49□□□□□ -1.21
VARSP26640 BTG4P1-201ENST00000510421 183 ntBASIC7.49□□□□□ -1.21
VARSP26640 AC017037.2-201ENST00000513850 890 ntBASIC7.49□□□□□ -1.21
VARSP26640 RNU6-445P-201ENST00000516949 107 ntBASIC7.49□□□□□ -1.21
VARSP26640 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC7.49□□□□□ -1.21
VARSP26640 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
VARSP26640 DERA-209ENST00000532964 854 ntTSL 5 BASIC7.49□□□□□ -1.21
VARSP26640 AP003174.3-201ENST00000537926 516 ntBASIC7.49□□□□□ -1.21
VARSP26640 AC018630.1-201ENST00000541376 925 ntBASIC7.49□□□□□ -1.21
VARSP26640 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC7.49□□□□□ -1.21
VARSP26640 NELL2-211ENST00000548826 559 ntTSL 2 BASIC7.49□□□□□ -1.21
VARSP26640 AC004817.2-201ENST00000561794 651 ntBASIC7.49□□□□□ -1.21
VARSP26640 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC7.49□□□□□ -1.21
VARSP26640 MIR4642-201ENST00000583943 82 ntBASIC7.49□□□□□ -1.21
VARSP26640 MIR3149-201ENST00000584629 83 ntBASIC7.49□□□□□ -1.21
VARSP26640 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC7.49□□□□□ -1.21
VARSP26640 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC7.49□□□□□ -1.21
VARSP26640 AL109918.2-201ENST00000605188 279 ntBASIC7.49□□□□□ -1.21
VARSP26640 AL355472.4-201ENST00000610233 626 ntBASIC7.49□□□□□ -1.21
VARSP26640 SLC20A1P2-201ENST00000618036 966 ntBASIC7.49□□□□□ -1.21
VARSP26640 C5orf56-207ENST00000621237 486 ntAPPRIS P5 TSL 2 BASIC7.49□□□□□ -1.21
VARSP26640 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.49□□□□□ -1.21
VARSP26640 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC7.49□□□□□ -1.21
VARSP26640 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
VARSP26640 MFSD8-218ENST00000641186 4448 ntBASIC7.49□□□□□ -1.21
VARSP26640 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC7.49□□□□□ -1.21
VARSP26640 FANCL-203ENST00000403295 1576 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
VARSP26640 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
VARSP26640 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.49□□□□□ -1.21
VARSP26640 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
VARSP26640 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
VARSP26640 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.49□□□□□ -1.21
VARSP26640 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC7.49□□□□□ -1.21
VARSP26640 AC104581.5-201ENST00000624171 7141 ntBASIC7.49□□□□□ -1.21
VARSP26640 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
VARSP26640 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
VARSP26640 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
VARSP26640 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
VARSP26640 MAPK6PS2-201ENST00000379571 2060 ntBASIC7.48□□□□□ -1.21
VARSP26640 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
VARSP26640 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC7.48□□□□□ -1.21
VARSP26640 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms