Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TNFSF4P23510 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.38□□□□□ -1.55
TNFSF4P23510 AP005639.1-201ENST00000526939 192 ntBASIC5.38□□□□□ -1.55
TNFSF4P23510 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.38□□□□□ -1.55
TNFSF4P23510 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.38□□□□□ -1.55
TNFSF4P23510 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.38□□□□□ -1.55
TNFSF4P23510 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.38□□□□□ -1.55
TNFSF4P23510 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.38□□□□□ -1.55
TNFSF4P23510 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.38□□□□□ -1.55
TNFSF4P23510 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.38□□□□□ -1.55
TNFSF4P23510 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.38□□□□□ -1.55
TNFSF4P23510 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.38□□□□□ -1.55
TNFSF4P23510 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TNFSF4P23510 AC005332.4-201ENST00000592752 579 ntBASIC5.38□□□□□ -1.55
TNFSF4P23510 AC068790.7-201ENST00000602347 528 ntBASIC5.38□□□□□ -1.55
TNFSF4P23510 AC011453.2-201ENST00000603737 729 ntBASIC5.38□□□□□ -1.55
TNFSF4P23510 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.38□□□□□ -1.55
TNFSF4P23510 AC016877.3-201ENST00000606778 504 ntBASIC5.38□□□□□ -1.55
TNFSF4P23510 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.38□□□□□ -1.55
TNFSF4P23510 AL008723.3-201ENST00000608926 449 ntBASIC5.38□□□□□ -1.55
TNFSF4P23510 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.38□□□□□ -1.55
TNFSF4P23510 AP000676.4-201ENST00000624659 623 ntBASIC5.38□□□□□ -1.55
TNFSF4P23510 MFSD8-245ENST00000641743 948 ntBASIC5.38□□□□□ -1.55
TNFSF4P23510 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TNFSF4P23510 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TNFSF4P23510 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.38□□□□□ -1.55
TNFSF4P23510 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TNFSF4P23510 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TNFSF4P23510 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
TNFSF4P23510 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TNFSF4P23510 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TNFSF4P23510 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TNFSF4P23510 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TNFSF4P23510 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TNFSF4P23510 AC125336.1-201ENST00000508893 2827 ntBASIC5.38□□□□□ -1.55
TNFSF4P23510 AC011369.2-201ENST00000624423 1567 ntBASIC5.38□□□□□ -1.55
TNFSF4P23510 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TNFSF4P23510 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.37□□□□□ -1.55
TNFSF4P23510 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
TNFSF4P23510 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
TNFSF4P23510 AL731532.1-201ENST00000623972 4236 ntBASIC5.37□□□□□ -1.55
TNFSF4P23510 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TNFSF4P23510 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TNFSF4P23510 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TNFSF4P23510 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TNFSF4P23510 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
TNFSF4P23510 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TNFSF4P23510 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TNFSF4P23510 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
TNFSF4P23510 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TNFSF4P23510 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
TNFSF4P23510 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
TNFSF4P23510 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.37□□□□□ -1.55
TNFSF4P23510 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
TNFSF4P23510 RN7SKP86-201ENST00000410454 332 ntBASIC5.37□□□□□ -1.55
TNFSF4P23510 RNU6-575P-201ENST00000411326 105 ntBASIC5.37□□□□□ -1.55
TNFSF4P23510 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.37□□□□□ -1.55
TNFSF4P23510 OR4K6P-201ENST00000416478 897 ntBASIC5.37□□□□□ -1.55
TNFSF4P23510 RPS7P8-201ENST00000418311 581 ntBASIC5.37□□□□□ -1.55
TNFSF4P23510 OR2X1P-201ENST00000421144 687 ntBASIC5.37□□□□□ -1.55
TNFSF4P23510 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.37□□□□□ -1.55
TNFSF4P23510 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.37□□□□□ -1.55
TNFSF4P23510 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TNFSF4P23510 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.37□□□□□ -1.55
TNFSF4P23510 NANOGP2-201ENST00000435391 727 ntBASIC5.37□□□□□ -1.55
TNFSF4P23510 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.37□□□□□ -1.55
TNFSF4P23510 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.37□□□□□ -1.55
TNFSF4P23510 MORF4-201ENST00000447135 971 ntBASIC5.37□□□□□ -1.55
TNFSF4P23510 AL591363.1-201ENST00000450091 483 ntBASIC5.37□□□□□ -1.55
TNFSF4P23510 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.37□□□□□ -1.55
TNFSF4P23510 AL022319.1-201ENST00000458183 1167 ntBASIC5.37□□□□□ -1.55
TNFSF4P23510 AC005410.1-202ENST00000460347 485 ntBASIC5.37□□□□□ -1.55
TNFSF4P23510 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.37□□□□□ -1.55
TNFSF4P23510 RPL17P2-201ENST00000491913 451 ntBASIC5.37□□□□□ -1.55
TNFSF4P23510 AC021146.5-201ENST00000503544 545 ntBASIC5.37□□□□□ -1.55
TNFSF4P23510 HMGN1P16-201ENST00000508308 283 ntBASIC5.37□□□□□ -1.55
TNFSF4P23510 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.37□□□□□ -1.55
TNFSF4P23510 AC008885.2-201ENST00000509506 930 ntBASIC5.37□□□□□ -1.55
TNFSF4P23510 EIF3KP3-201ENST00000514461 639 ntBASIC5.37□□□□□ -1.55
TNFSF4P23510 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.37□□□□□ -1.55
TNFSF4P23510 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.37□□□□□ -1.55
TNFSF4P23510 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.37□□□□□ -1.55
TNFSF4P23510 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.37□□□□□ -1.55
TNFSF4P23510 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.37□□□□□ -1.55
TNFSF4P23510 AC092709.1-201ENST00000521355 1045 ntBASIC5.37□□□□□ -1.55
TNFSF4P23510 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.37□□□□□ -1.55
TNFSF4P23510 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.37□□□□□ -1.55
TNFSF4P23510 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TNFSF4P23510 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.37□□□□□ -1.55
TNFSF4P23510 AC073916.1-201ENST00000545095 130 ntBASIC5.37□□□□□ -1.55
TNFSF4P23510 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
TNFSF4P23510 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.37□□□□□ -1.55
TNFSF4P23510 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.37□□□□□ -1.55
TNFSF4P23510 MTND4P33-201ENST00000556706 766 ntBASIC5.37□□□□□ -1.55
TNFSF4P23510 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.37□□□□□ -1.55
TNFSF4P23510 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.37□□□□□ -1.55
TNFSF4P23510 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.37□□□□□ -1.55
TNFSF4P23510 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.37□□□□□ -1.55
TNFSF4P23510 VN1R83P-201ENST00000595685 445 ntBASIC5.37□□□□□ -1.55
TNFSF4P23510 AP004247.3-201ENST00000608682 624 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms