Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
CTLA4P16410 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CTLA4P16410 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.46□□□□□ -1.7
CTLA4P16410 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.46□□□□□ -1.7
CTLA4P16410 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CTLA4P16410 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CTLA4P16410 SNORA11.3-201ENST00000408471 128 ntBASIC4.46□□□□□ -1.7
CTLA4P16410 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CTLA4P16410 CTSL3P-202ENST00000412179 788 ntBASIC4.46□□□□□ -1.7
CTLA4P16410 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.46□□□□□ -1.7
CTLA4P16410 OR5M12P-201ENST00000423388 929 ntBASIC4.46□□□□□ -1.7
CTLA4P16410 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC4.46□□□□□ -1.7
CTLA4P16410 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.46□□□□□ -1.7
CTLA4P16410 AL450023.3-201ENST00000440592 271 ntBASIC4.46□□□□□ -1.7
CTLA4P16410 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.46□□□□□ -1.7
CTLA4P16410 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.46□□□□□ -1.7
CTLA4P16410 GTF3AP5-201ENST00000442645 697 ntBASIC4.46□□□□□ -1.7
CTLA4P16410 FAR2P1-206ENST00000449736 709 ntBASIC4.46□□□□□ -1.7
CTLA4P16410 AC092647.2-201ENST00000452998 253 ntBASIC4.46□□□□□ -1.7
CTLA4P16410 HMGB1P4-201ENST00000455362 567 ntBASIC4.46□□□□□ -1.7
CTLA4P16410 RPS17P2-201ENST00000461663 408 ntBASIC4.46□□□□□ -1.7
CTLA4P16410 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.46□□□□□ -1.7
CTLA4P16410 USP9YP2-201ENST00000504503 1000 ntBASIC4.46□□□□□ -1.7
CTLA4P16410 AC010350.1-201ENST00000504908 231 ntBASIC4.46□□□□□ -1.7
CTLA4P16410 USP9YP1-201ENST00000513521 1002 ntBASIC4.46□□□□□ -1.7
CTLA4P16410 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.46□□□□□ -1.7
CTLA4P16410 RPL23AP53-201ENST00000521854 457 ntBASIC4.46□□□□□ -1.7
CTLA4P16410 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.46□□□□□ -1.7
CTLA4P16410 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.46□□□□□ -1.7
CTLA4P16410 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC4.46□□□□□ -1.7
CTLA4P16410 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.46□□□□□ -1.7
CTLA4P16410 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.46□□□□□ -1.7
CTLA4P16410 AP000864.1-201ENST00000609424 650 ntBASIC4.46□□□□□ -1.7
CTLA4P16410 Z95327.3-201ENST00000610385 572 ntBASIC4.46□□□□□ -1.7
CTLA4P16410 SNORA11.6-201ENST00000619030 128 ntBASIC4.46□□□□□ -1.7
CTLA4P16410 AC008115.4-201ENST00000619780 775 ntBASIC4.46□□□□□ -1.7
CTLA4P16410 AC015660.5-201ENST00000623238 564 ntBASIC4.46□□□□□ -1.7
CTLA4P16410 AC099494.2-201ENST00000623371 978 ntBASIC4.46□□□□□ -1.7
CTLA4P16410 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.46□□□□□ -1.7
CTLA4P16410 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.46□□□□□ -1.7
CTLA4P16410 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
CTLA4P16410 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
CTLA4P16410 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CTLA4P16410 SMG1P4-204ENST00000523028 4131 ntBASIC4.46□□□□□ -1.7
CTLA4P16410 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CTLA4P16410 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.46□□□□□ -1.7
CTLA4P16410 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CTLA4P16410 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CTLA4P16410 AL672167.1-204ENST00000641875 3017 ntBASIC4.46□□□□□ -1.7
CTLA4P16410 AC008079.2-201ENST00000623543 20396 ntBASIC4.45□□□□□ -1.7
CTLA4P16410 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CTLA4P16410 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.45□□□□□ -1.7
CTLA4P16410 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CTLA4P16410 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CTLA4P16410 AC007342.5-201ENST00000571340 2142 ntBASIC4.45□□□□□ -1.7
CTLA4P16410 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CTLA4P16410 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
CTLA4P16410 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CTLA4P16410 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.45□□□□□ -1.7
CTLA4P16410 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CTLA4P16410 SNORA70.10-201ENST00000384515 134 ntBASIC4.45□□□□□ -1.7
CTLA4P16410 ATP5HP3-201ENST00000396994 486 ntBASIC4.45□□□□□ -1.7
CTLA4P16410 RPL10P10-201ENST00000403509 664 ntBASIC4.45□□□□□ -1.7
CTLA4P16410 AL391361.1-201ENST00000405580 489 ntBASIC4.45□□□□□ -1.7
CTLA4P16410 MIR1286-201ENST00000408112 78 ntBASIC4.45□□□□□ -1.7
CTLA4P16410 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.45□□□□□ -1.7
CTLA4P16410 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CTLA4P16410 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
CTLA4P16410 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.45□□□□□ -1.7
CTLA4P16410 IGHV5-78-201ENST00000450948 295 ntBASIC4.45□□□□□ -1.7
CTLA4P16410 AC016724.1-201ENST00000453215 421 ntBASIC4.45□□□□□ -1.7
CTLA4P16410 AL389915.2-201ENST00000454576 441 ntBASIC4.45□□□□□ -1.7
CTLA4P16410 COPS8P2-201ENST00000473228 627 ntBASIC4.45□□□□□ -1.7
CTLA4P16410 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC4.45□□□□□ -1.7
CTLA4P16410 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.45□□□□□ -1.7
CTLA4P16410 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.45□□□□□ -1.7
CTLA4P16410 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC4.45□□□□□ -1.7
CTLA4P16410 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.45□□□□□ -1.7
CTLA4P16410 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.45□□□□□ -1.7
CTLA4P16410 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.45□□□□□ -1.7
CTLA4P16410 OR11J2P-201ENST00000555298 907 ntBASIC4.45□□□□□ -1.7
CTLA4P16410 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.45□□□□□ -1.7
CTLA4P16410 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.45□□□□□ -1.7
CTLA4P16410 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.45□□□□□ -1.7
CTLA4P16410 AC009852.2-201ENST00000567898 485 ntBASIC4.45□□□□□ -1.7
CTLA4P16410 AC015914.2-201ENST00000618167 288 ntBASIC4.45□□□□□ -1.7
CTLA4P16410 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.45□□□□□ -1.7
CTLA4P16410 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.45□□□□□ -1.7
CTLA4P16410 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CTLA4P16410 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CTLA4P16410 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CTLA4P16410 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CTLA4P16410 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.45□□□□□ -1.7
CTLA4P16410 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.45□□□□□ -1.7
CTLA4P16410 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CTLA4P16410 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.45□□□□□ -1.7
CTLA4P16410 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CTLA4P16410 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.45□□□□□ -1.7
CTLA4P16410 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.45□□□□□ -1.7
CTLA4P16410 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms