Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RB1P06400 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.78□□□□□ -1.48
RB1P06400 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
RB1P06400 AC026951.1-201ENST00000559530 2459 ntBASIC5.77□□□□□ -1.48
RB1P06400 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.77□□□□□ -1.48
RB1P06400 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
RB1P06400 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.77□□□□□ -1.49
RB1P06400 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RB1P06400 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
RB1P06400 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.77□□□□□ -1.49
RB1P06400 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
RB1P06400 AC010132.2-201ENST00000295493 1043 ntBASIC5.77□□□□□ -1.49
RB1P06400 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
RB1P06400 RN7SKP104-201ENST00000362605 328 ntBASIC5.77□□□□□ -1.49
RB1P06400 AL078599.1-201ENST00000402075 293 ntBASIC5.77□□□□□ -1.49
RB1P06400 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.77□□□□□ -1.49
RB1P06400 AL360081.1-201ENST00000428299 555 ntBASIC5.77□□□□□ -1.49
RB1P06400 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.77□□□□□ -1.49
RB1P06400 BUD31P2-201ENST00000449374 300 ntBASIC5.77□□□□□ -1.49
RB1P06400 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.77□□□□□ -1.49
RB1P06400 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.77□□□□□ -1.49
RB1P06400 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.77□□□□□ -1.49
RB1P06400 EIF3KP3-201ENST00000514461 639 ntBASIC5.77□□□□□ -1.49
RB1P06400 RN7SKP34-201ENST00000516142 244 ntBASIC5.77□□□□□ -1.49
RB1P06400 RN7SKP253-201ENST00000516424 309 ntBASIC5.77□□□□□ -1.49
RB1P06400 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.77□□□□□ -1.49
RB1P06400 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.77□□□□□ -1.49
RB1P06400 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.77□□□□□ -1.49
RB1P06400 AC092868.3-201ENST00000560515 784 ntBASIC5.77□□□□□ -1.49
RB1P06400 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.77□□□□□ -1.49
RB1P06400 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
RB1P06400 AC011487.3-201ENST00000593607 453 ntBASIC5.77□□□□□ -1.49
RB1P06400 AC015722.2-201ENST00000622210 551 ntBASIC5.77□□□□□ -1.49
RB1P06400 AC091905.4-201ENST00000623432 202 ntBASIC5.77□□□□□ -1.49
RB1P06400 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
RB1P06400 AC232271.1-201ENST00000602455 2715 ntBASIC5.77□□□□□ -1.49
RB1P06400 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
RB1P06400 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RB1P06400 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RB1P06400 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.77□□□□□ -1.49
RB1P06400 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.77□□□□□ -1.49
RB1P06400 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RB1P06400 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.77□□□□□ -1.49
RB1P06400 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
RB1P06400 AP002512.4-202ENST00000641599 4530 ntBASIC5.76□□□□□ -1.49
RB1P06400 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
RB1P06400 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
RB1P06400 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
RB1P06400 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RB1P06400 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RB1P06400 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
RB1P06400 RNA5SP123-201ENST00000363244 119 ntBASIC5.76□□□□□ -1.49
RB1P06400 SNORA27.3-201ENST00000364937 134 ntBASIC5.76□□□□□ -1.49
RB1P06400 RNU11-201ENST00000387069 134 ntBASIC5.76□□□□□ -1.49
RB1P06400 OR1F12-201ENST00000402365 945 ntBASIC5.76□□□□□ -1.49
RB1P06400 RAB28P1-201ENST00000411517 641 ntBASIC5.76□□□□□ -1.49
RB1P06400 RNF19BPX-201ENST00000426224 625 ntBASIC5.76□□□□□ -1.49
RB1P06400 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.76□□□□□ -1.49
RB1P06400 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.76□□□□□ -1.49
RB1P06400 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.76□□□□□ -1.49
RB1P06400 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.76□□□□□ -1.49
RB1P06400 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.76□□□□□ -1.49
RB1P06400 FTH1P2-201ENST00000466086 412 ntBASIC5.76□□□□□ -1.49
RB1P06400 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
RB1P06400 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.76□□□□□ -1.49
RB1P06400 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.76□□□□□ -1.49
RB1P06400 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.76□□□□□ -1.49
RB1P06400 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.76□□□□□ -1.49
RB1P06400 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.76□□□□□ -1.49
RB1P06400 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
RB1P06400 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.76□□□□□ -1.49
RB1P06400 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.76□□□□□ -1.49
RB1P06400 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.76□□□□□ -1.49
RB1P06400 AP005403.1-201ENST00000579720 229 ntBASIC5.76□□□□□ -1.49
RB1P06400 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
RB1P06400 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.76□□□□□ -1.49
RB1P06400 AF230666.2-201ENST00000602328 725 ntBASIC5.76□□□□□ -1.49
RB1P06400 AL360012.1-201ENST00000602813 131 ntBASIC5.76□□□□□ -1.49
RB1P06400 AC009597.2-201ENST00000604659 592 ntBASIC5.76□□□□□ -1.49
RB1P06400 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.76□□□□□ -1.49
RB1P06400 RMST_5.1-201ENST00000618704 126 ntBASIC5.76□□□□□ -1.49
RB1P06400 AC074276.2-201ENST00000619891 348 ntBASIC5.76□□□□□ -1.49
RB1P06400 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.76□□□□□ -1.49
RB1P06400 AC073592.7-201ENST00000623659 507 ntBASIC5.76□□□□□ -1.49
RB1P06400 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.76□□□□□ -1.49
RB1P06400 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
RB1P06400 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
RB1P06400 AC022164.1-201ENST00000568767 2673 ntBASIC5.75□□□□□ -1.49
RB1P06400 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
RB1P06400 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
RB1P06400 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RB1P06400 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RB1P06400 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
RB1P06400 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
RB1P06400 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RB1P06400 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RB1P06400 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.75□□□□□ -1.49
RB1P06400 RNU1-136P-201ENST00000384181 164 ntBASIC5.75□□□□□ -1.49
RB1P06400 CYB5AP4-201ENST00000396692 399 ntBASIC5.75□□□□□ -1.49
RB1P06400 FABP12P1-201ENST00000401911 322 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms