Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC011005.3-201ENST00000491624 395 ntBASIC7.89□□□□□ -1.15
RAPGEF3O95398 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RAPGEF3O95398 RNU6-943P-201ENST00000516960 98 ntBASIC7.89□□□□□ -1.15
RAPGEF3O95398 MAL2-201ENST00000522112 573 ntTSL 4 BASIC7.89□□□□□ -1.15
RAPGEF3O95398 AC100784.1-201ENST00000522790 310 ntBASIC7.89□□□□□ -1.15
RAPGEF3O95398 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC7.89□□□□□ -1.15
RAPGEF3O95398 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
RAPGEF3O95398 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
RAPGEF3O95398 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
RAPGEF3O95398 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC7.89□□□□□ -1.15
RAPGEF3O95398 MIR4277-201ENST00000578298 84 ntBASIC7.89□□□□□ -1.15
RAPGEF3O95398 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC7.89□□□□□ -1.15
RAPGEF3O95398 VN1R81P-201ENST00000602085 372 ntBASIC7.89□□□□□ -1.15
RAPGEF3O95398 AC120053.1-201ENST00000607706 736 ntBASIC7.89□□□□□ -1.15
RAPGEF3O95398 AC008147.4-201ENST00000617570 1204 ntBASIC7.89□□□□□ -1.15
RAPGEF3O95398 AL049777.1-201ENST00000622740 518 ntBASIC7.89□□□□□ -1.15
RAPGEF3O95398 AC073869.8-201ENST00000641806 335 ntBASIC7.89□□□□□ -1.15
RAPGEF3O95398 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
RAPGEF3O95398 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
RAPGEF3O95398 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC7.89□□□□□ -1.15
RAPGEF3O95398 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
RAPGEF3O95398 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
RAPGEF3O95398 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RAPGEF3O95398 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RAPGEF3O95398 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
RAPGEF3O95398 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RAPGEF3O95398 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC7.89□□□□□ -1.15
RAPGEF3O95398 ZNF812P-201ENST00000457674 1694 ntBASIC7.89□□□□□ -1.15
RAPGEF3O95398 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
RAPGEF3O95398 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC7.88□□□□□ -1.15
RAPGEF3O95398 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC7.88□□□□□ -1.15
RAPGEF3O95398 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
RAPGEF3O95398 AC005725.1-201ENST00000577346 2607 ntBASIC7.88□□□□□ -1.15
RAPGEF3O95398 CASC19-260ENST00000641828 2001 ntBASIC7.88□□□□□ -1.15
RAPGEF3O95398 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC7.88□□□□□ -1.15
RAPGEF3O95398 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.88□□□□□ -1.15
RAPGEF3O95398 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RAPGEF3O95398 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC7.88□□□□□ -1.15
RAPGEF3O95398 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RAPGEF3O95398 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RAPGEF3O95398 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
RAPGEF3O95398 CCNB2P1-201ENST00000399411 1150 ntBASIC7.88□□□□□ -1.15
RAPGEF3O95398 RPS3AP23-201ENST00000401762 784 ntBASIC7.88□□□□□ -1.15
RAPGEF3O95398 RNGTTP1-201ENST00000420965 728 ntBASIC7.88□□□□□ -1.15
RAPGEF3O95398 AC073508.1-201ENST00000428866 656 ntBASIC7.88□□□□□ -1.15
RAPGEF3O95398 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC7.88□□□□□ -1.15
RAPGEF3O95398 AC073143.1-201ENST00000436316 395 ntBASIC7.88□□□□□ -1.15
RAPGEF3O95398 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC7.88□□□□□ -1.15
RAPGEF3O95398 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC7.88□□□□□ -1.15
RAPGEF3O95398 RNF2P1-201ENST00000442955 1010 ntBASIC7.88□□□□□ -1.15
RAPGEF3O95398 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC7.88□□□□□ -1.15
RAPGEF3O95398 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC7.88□□□□□ -1.15
RAPGEF3O95398 OR9N1P-201ENST00000491296 333 ntBASIC7.88□□□□□ -1.15
RAPGEF3O95398 RN7SL244P-201ENST00000493405 297 ntBASIC7.88□□□□□ -1.15
RAPGEF3O95398 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC7.88□□□□□ -1.15
RAPGEF3O95398 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC7.88□□□□□ -1.15
RAPGEF3O95398 GAPDHP56-201ENST00000506031 988 ntBASIC7.88□□□□□ -1.15
RAPGEF3O95398 RN7SKP92-201ENST00000517266 244 ntBASIC7.88□□□□□ -1.15
RAPGEF3O95398 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC7.88□□□□□ -1.15
RAPGEF3O95398 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC7.88□□□□□ -1.15
RAPGEF3O95398 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC7.88□□□□□ -1.15
RAPGEF3O95398 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC7.88□□□□□ -1.15
RAPGEF3O95398 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC7.88□□□□□ -1.15
RAPGEF3O95398 MIR4760-201ENST00000585040 80 ntBASIC7.88□□□□□ -1.15
RAPGEF3O95398 BNIP3P22-201ENST00000593399 556 ntBASIC7.88□□□□□ -1.15
RAPGEF3O95398 AC105254.2-201ENST00000603636 436 ntBASIC7.88□□□□□ -1.15
RAPGEF3O95398 AL356608.1-201ENST00000610034 820 ntBASIC7.88□□□□□ -1.15
RAPGEF3O95398 AC022960.3-201ENST00000619794 441 ntBASIC7.88□□□□□ -1.15
RAPGEF3O95398 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC7.88□□□□□ -1.15
RAPGEF3O95398 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RAPGEF3O95398 AL117339.4-201ENST00000608335 7063 ntBASIC7.88□□□□□ -1.15
RAPGEF3O95398 HSPD1P7-201ENST00000447985 1686 ntBASIC7.88□□□□□ -1.15
RAPGEF3O95398 AC139426.3-201ENST00000605648 2059 ntBASIC7.88□□□□□ -1.15
RAPGEF3O95398 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
RAPGEF3O95398 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RAPGEF3O95398 HSPA8P19-201ENST00000505359 1517 ntBASIC7.88□□□□□ -1.15
RAPGEF3O95398 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
RAPGEF3O95398 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC7.87□□□□□ -1.15
RAPGEF3O95398 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
RAPGEF3O95398 AC068733.2-201ENST00000605434 1418 ntBASIC7.87□□□□□ -1.15
RAPGEF3O95398 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
RAPGEF3O95398 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
RAPGEF3O95398 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
RAPGEF3O95398 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC7.87□□□□□ -1.15
RAPGEF3O95398 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
RAPGEF3O95398 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
RAPGEF3O95398 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
RAPGEF3O95398 RPL12P43-201ENST00000420608 499 ntBASIC7.87□□□□□ -1.15
RAPGEF3O95398 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC7.87□□□□□ -1.15
RAPGEF3O95398 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC7.87□□□□□ -1.15
RAPGEF3O95398 KCTD10P1-201ENST00000434203 625 ntBASIC7.87□□□□□ -1.15
RAPGEF3O95398 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC7.87□□□□□ -1.15
RAPGEF3O95398 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC7.87□□□□□ -1.15
RAPGEF3O95398 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC7.87□□□□□ -1.15
RAPGEF3O95398 RBMY2TP-201ENST00000451162 947 ntBASIC7.87□□□□□ -1.15
RAPGEF3O95398 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC7.87□□□□□ -1.15
RAPGEF3O95398 MORF4L1P3-201ENST00000525966 950 ntBASIC7.87□□□□□ -1.15
RAPGEF3O95398 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.87□□□□□ -1.15
RAPGEF3O95398 AC122688.1-201ENST00000541494 223 ntBASIC7.87□□□□□ -1.15
RAPGEF3O95398 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC7.87□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms