Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.28□□□□□ -1.72
SDCBPO00560 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC4.28□□□□□ -1.72
SDCBPO00560 AC093655.2-201ENST00000425735 631 ntBASIC4.28□□□□□ -1.72
SDCBPO00560 HSPE1P16-201ENST00000426640 348 ntBASIC4.28□□□□□ -1.72
SDCBPO00560 RPL7L1P9-201ENST00000431298 745 ntBASIC4.28□□□□□ -1.72
SDCBPO00560 GAPDHP34-201ENST00000432112 823 ntBASIC4.28□□□□□ -1.72
SDCBPO00560 SPRYD7P1-201ENST00000443861 570 ntBASIC4.28□□□□□ -1.72
SDCBPO00560 Z92846.1-201ENST00000456203 268 ntBASIC4.28□□□□□ -1.72
SDCBPO00560 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.28□□□□□ -1.72
SDCBPO00560 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SDCBPO00560 AC108693.1-201ENST00000496068 432 ntBASIC4.28□□□□□ -1.72
SDCBPO00560 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.28□□□□□ -1.72
SDCBPO00560 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.28□□□□□ -1.72
SDCBPO00560 AC027308.1-201ENST00000517993 110 ntBASIC4.28□□□□□ -1.72
SDCBPO00560 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.28□□□□□ -1.72
SDCBPO00560 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.28□□□□□ -1.72
SDCBPO00560 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.28□□□□□ -1.72
SDCBPO00560 AC069307.1-201ENST00000602820 447 ntBASIC4.28□□□□□ -1.72
SDCBPO00560 AC109309.2-201ENST00000612597 332 ntBASIC4.28□□□□□ -1.72
SDCBPO00560 MIR6837-201ENST00000620884 64 ntBASIC4.28□□□□□ -1.72
SDCBPO00560 AC136428.4-201ENST00000634254 1155 ntBASIC4.28□□□□□ -1.72
SDCBPO00560 AL049767.1-202ENST00000637826 242 ntBASIC4.28□□□□□ -1.72
SDCBPO00560 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.28□□□□□ -1.72
SDCBPO00560 AC107068.1-201ENST00000563286 4218 ntBASIC4.28□□□□□ -1.72
SDCBPO00560 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.28□□□□□ -1.72
SDCBPO00560 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.28□□□□□ -1.72
SDCBPO00560 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SDCBPO00560 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.73
SDCBPO00560 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.28□□□□□ -1.73
SDCBPO00560 CASC19-221ENST00000641309 1382 ntBASIC4.27□□□□□ -1.73
SDCBPO00560 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SDCBPO00560 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC4.27□□□□□ -1.73
SDCBPO00560 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SDCBPO00560 AC019072.1-201ENST00000604535 1551 ntBASIC4.27□□□□□ -1.73
SDCBPO00560 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
SDCBPO00560 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SDCBPO00560 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SDCBPO00560 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SDCBPO00560 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SDCBPO00560 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.27□□□□□ -1.73
SDCBPO00560 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SDCBPO00560 AC120036.2-201ENST00000509729 1474 ntBASIC4.27□□□□□ -1.73
SDCBPO00560 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SDCBPO00560 RNA5SP132-201ENST00000364725 118 ntBASIC4.27□□□□□ -1.73
SDCBPO00560 MIR600-201ENST00000385007 98 ntBASIC4.27□□□□□ -1.73
SDCBPO00560 MIR1271-201ENST00000408537 86 ntBASIC4.27□□□□□ -1.73
SDCBPO00560 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.27□□□□□ -1.73
SDCBPO00560 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.27□□□□□ -1.73
SDCBPO00560 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.27□□□□□ -1.73
SDCBPO00560 RPS26P4-201ENST00000431743 355 ntBASIC4.27□□□□□ -1.73
SDCBPO00560 RPL12P11-201ENST00000439970 501 ntBASIC4.27□□□□□ -1.73
SDCBPO00560 AC004980.3-201ENST00000447046 365 ntBASIC4.27□□□□□ -1.73
SDCBPO00560 RPS26P41-201ENST00000450370 284 ntBASIC4.27□□□□□ -1.73
SDCBPO00560 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.27□□□□□ -1.73
SDCBPO00560 GYG1P1-201ENST00000460864 698 ntBASIC4.27□□□□□ -1.73
SDCBPO00560 AL591473.1-201ENST00000464297 313 ntBASIC4.27□□□□□ -1.73
SDCBPO00560 RN7SL174P-201ENST00000475578 289 ntBASIC4.27□□□□□ -1.73
SDCBPO00560 OR2AO1P-201ENST00000476497 403 ntBASIC4.27□□□□□ -1.73
SDCBPO00560 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.27□□□□□ -1.73
SDCBPO00560 AC073073.1-201ENST00000493920 463 ntBASIC4.27□□□□□ -1.73
SDCBPO00560 RPS4XP20-201ENST00000505751 772 ntBASIC4.27□□□□□ -1.73
SDCBPO00560 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.27□□□□□ -1.73
SDCBPO00560 AC005868.1-201ENST00000536421 331 ntBASIC4.27□□□□□ -1.73
SDCBPO00560 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
SDCBPO00560 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SDCBPO00560 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.27□□□□□ -1.73
SDCBPO00560 AL049779.2-201ENST00000553847 315 ntBASIC4.27□□□□□ -1.73
SDCBPO00560 NDUFB4P11-201ENST00000560510 395 ntBASIC4.27□□□□□ -1.73
SDCBPO00560 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SDCBPO00560 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.27□□□□□ -1.73
SDCBPO00560 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SDCBPO00560 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.27□□□□□ -1.73
SDCBPO00560 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.27□□□□□ -1.73
SDCBPO00560 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.27□□□□□ -1.73
SDCBPO00560 AL359513.1-201ENST00000614364 557 ntBASIC4.27□□□□□ -1.73
SDCBPO00560 AC022106.2-201ENST00000620114 757 ntBASIC4.27□□□□□ -1.73
SDCBPO00560 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.27□□□□□ -1.73
SDCBPO00560 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.27□□□□□ -1.73
SDCBPO00560 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.27□□□□□ -1.73
SDCBPO00560 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.27□□□□□ -1.73
SDCBPO00560 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.27□□□□□ -1.73
SDCBPO00560 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SDCBPO00560 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.27□□□□□ -1.73
SDCBPO00560 AC012078.1-201ENST00000405035 1646 ntBASIC4.27□□□□□ -1.73
SDCBPO00560 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.27□□□□□ -1.73
SDCBPO00560 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
SDCBPO00560 AC133552.1-201ENST00000569988 4007 ntBASIC4.27□□□□□ -1.73
SDCBPO00560 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
SDCBPO00560 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SDCBPO00560 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SDCBPO00560 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.27□□□□□ -1.73
SDCBPO00560 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.26□□□□□ -1.73
SDCBPO00560 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SDCBPO00560 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.26□□□□□ -1.73
SDCBPO00560 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SDCBPO00560 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SDCBPO00560 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.26□□□□□ -1.73
SDCBPO00560 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SDCBPO00560 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
SDCBPO00560 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms