Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 RPL23AP26-201ENST00000412728 464 ntBASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 SLC20A1P1-201ENST00000413906 956 ntBASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 VN1R37P-201ENST00000419096 748 ntBASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 AC009362.1-201ENST00000427253 406 ntBASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 Z99758.1-201ENST00000432081 368 ntTSL 3 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 PPIAP17-201ENST00000438507 471 ntBASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 NPM1P23-201ENST00000440193 849 ntBASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 SLC25A18P1-201ENST00000449385 454 ntBASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 AL356981.1-201ENST00000454879 684 ntBASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 EIF2S2P4-201ENST00000461070 984 ntBASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 RN7SL456P-201ENST00000469290 295 ntBASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 AP003385.3-201ENST00000472498 287 ntBASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 AC092754.1-201ENST00000472975 479 ntBASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 AC107029.1-201ENST00000484675 465 ntTSL 2 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 AC104971.1-201ENST00000495117 578 ntBASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 RNA5SP434-201ENST00000516647 121 ntBASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 AC107952.1-201ENST00000524200 376 ntBASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 AC012157.1-201ENST00000549725 501 ntTSL 4 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 AC018552.3-201ENST00000567416 561 ntBASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 AC009101.1-201ENST00000568135 242 ntBASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 CYCSP40-201ENST00000575927 294 ntBASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 MIR3157-201ENST00000578688 85 ntBASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 XIST-210ENST00000602863 775 ntTSL 3 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CHKB-CPT1BH3BT56 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 EOGT-210ENST00000615922 1931 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 OR2AT4-201ENST00000305159 1042 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 AC007685.1-201ENST00000329806 452 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 OR7E25P-201ENST00000344844 931 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 SNORA30B-201ENST00000365319 129 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 SNORA70-201ENST00000384436 135 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 YWHAZP4-201ENST00000392459 708 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 AC004386.1-201ENST00000393214 761 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 RPL5P19-201ENST00000404228 893 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 RN7SKP177-201ENST00000410567 355 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 RN7SKP205-201ENST00000410999 307 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 VDAC1P9-201ENST00000412766 841 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 GJA6P-201ENST00000415117 1042 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 TMBIM7P-201ENST00000418074 855 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 MTND4LP13-201ENST00000425022 298 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 AC115283.1-201ENST00000427353 400 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 HSPE1P27-201ENST00000430808 296 ntBASIC2.72□□□□□ -1.97
CHKB-CPT1BH3BT56 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms