Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM49D1C9J1S8 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.04□□□□□ -1.6
TRIM49D1C9J1S8 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
TRIM49D1C9J1S8 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM49D1C9J1S8 SALL4P2-201ENST00000423288 2910 ntBASIC5.03□□□□□ -1.6
TRIM49D1C9J1S8 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
TRIM49D1C9J1S8 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM49D1C9J1S8 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM49D1C9J1S8 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.03□□□□□ -1.6
TRIM49D1C9J1S8 AC126323.6-202ENST00000568092 3511 ntBASIC5.03□□□□□ -1.6
TRIM49D1C9J1S8 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM49D1C9J1S8 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
TRIM49D1C9J1S8 MIR600-201ENST00000385007 98 ntBASIC5.03□□□□□ -1.6
TRIM49D1C9J1S8 LRRC37BP1-201ENST00000398851 714 ntBASIC5.03□□□□□ -1.6
TRIM49D1C9J1S8 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM49D1C9J1S8 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM49D1C9J1S8 AC073052.1-201ENST00000440417 714 ntBASIC5.03□□□□□ -1.6
TRIM49D1C9J1S8 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM49D1C9J1S8 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM49D1C9J1S8 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.03□□□□□ -1.6
TRIM49D1C9J1S8 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM49D1C9J1S8 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM49D1C9J1S8 EIF4A2P5-201ENST00000529914 499 ntBASIC5.03□□□□□ -1.6
TRIM49D1C9J1S8 AC134349.2-201ENST00000535136 910 ntBASIC5.03□□□□□ -1.6
TRIM49D1C9J1S8 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM49D1C9J1S8 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM49D1C9J1S8 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM49D1C9J1S8 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.03□□□□□ -1.6
TRIM49D1C9J1S8 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.03□□□□□ -1.6
TRIM49D1C9J1S8 SAMMSON-209ENST00000641222 1100 ntBASIC5.03□□□□□ -1.6
TRIM49D1C9J1S8 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
TRIM49D1C9J1S8 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM49D1C9J1S8 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
TRIM49D1C9J1S8 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM49D1C9J1S8 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM49D1C9J1S8 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM49D1C9J1S8 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
TRIM49D1C9J1S8 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM49D1C9J1S8 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
TRIM49D1C9J1S8 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
TRIM49D1C9J1S8 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.03□□□□□ -1.6
TRIM49D1C9J1S8 AC068870.3-201ENST00000625077 2536 ntBASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 AL022322.2-201ENST00000624072 20397 ntBASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 AC107068.1-201ENST00000563286 4218 ntBASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 AL353625.1-202ENST00000366273 571 ntBASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 RN7SKP286-201ENST00000410894 299 ntBASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 SLC35E1P1-201ENST00000419313 864 ntBASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 AC093655.2-201ENST00000425735 631 ntBASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 HMGB1P4-201ENST00000455362 567 ntBASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 RPS17P2-201ENST00000461663 408 ntBASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 RN7SL799P-201ENST00000475891 298 ntBASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 AC016839.1-201ENST00000578162 867 ntBASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 MIR3614-201ENST00000581261 86 ntBASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 RNA5SP440-201ENST00000612665 119 ntBASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 AP000542.2-201ENST00000623199 6179 ntBASIC5.02□□□□□ -1.61
TRIM49D1C9J1S8 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
TRIM49D1C9J1S8 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM49D1C9J1S8 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM49D1C9J1S8 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM49D1C9J1S8 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM49D1C9J1S8 SNORA73.1-201ENST00000363107 205 ntBASIC5.01□□□□□ -1.61
TRIM49D1C9J1S8 RN7SKP269-201ENST00000365545 319 ntBASIC5.01□□□□□ -1.61
TRIM49D1C9J1S8 SNORA67-201ENST00000384423 137 ntBASIC5.01□□□□□ -1.61
TRIM49D1C9J1S8 SNORA77-201ENST00000408716 125 ntBASIC5.01□□□□□ -1.61
TRIM49D1C9J1S8 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.01□□□□□ -1.61
TRIM49D1C9J1S8 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms