Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC025175.1-201ENST00000606482 759 ntBASIC4.43□□□□□ -1.7
SRRM4A7MD48 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.43□□□□□ -1.7
SRRM4A7MD48 AL359742.1-201ENST00000622497 540 ntBASIC4.43□□□□□ -1.7
SRRM4A7MD48 AC073869.8-201ENST00000641806 335 ntBASIC4.43□□□□□ -1.7
SRRM4A7MD48 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.43□□□□□ -1.7
SRRM4A7MD48 AC100757.1-201ENST00000616872 1835 ntBASIC4.43□□□□□ -1.7
SRRM4A7MD48 AC114786.1-201ENST00000512892 1415 ntBASIC4.43□□□□□ -1.7
SRRM4A7MD48 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SRRM4A7MD48 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SRRM4A7MD48 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SRRM4A7MD48 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SRRM4A7MD48 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SRRM4A7MD48 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
SRRM4A7MD48 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
SRRM4A7MD48 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SRRM4A7MD48 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SRRM4A7MD48 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.43□□□□□ -1.7
SRRM4A7MD48 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.43□□□□□ -1.7
SRRM4A7MD48 YES1P1-201ENST00000418510 1628 ntBASIC4.43□□□□□ -1.7
SRRM4A7MD48 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SRRM4A7MD48 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SRRM4A7MD48 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.42□□□□□ -1.7
SRRM4A7MD48 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
SRRM4A7MD48 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
SRRM4A7MD48 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SRRM4A7MD48 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SRRM4A7MD48 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SRRM4A7MD48 AC133552.1-201ENST00000569988 4007 ntBASIC4.42□□□□□ -1.7
SRRM4A7MD48 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SRRM4A7MD48 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SRRM4A7MD48 RNU6-650P-201ENST00000365658 111 ntBASIC4.42□□□□□ -1.7
SRRM4A7MD48 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.42□□□□□ -1.7
SRRM4A7MD48 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.42□□□□□ -1.7
SRRM4A7MD48 RNU6-532P-201ENST00000384318 107 ntBASIC4.42□□□□□ -1.7
SRRM4A7MD48 MIR320B1-201ENST00000390209 79 ntBASIC4.42□□□□□ -1.7
SRRM4A7MD48 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SRRM4A7MD48 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
SRRM4A7MD48 AL353692.2-201ENST00000407054 335 ntBASIC4.42□□□□□ -1.7
SRRM4A7MD48 UBE2V1P11-201ENST00000411559 285 ntBASIC4.42□□□□□ -1.7
SRRM4A7MD48 TRGV6-201ENST00000417928 299 ntBASIC4.42□□□□□ -1.7
SRRM4A7MD48 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.42□□□□□ -1.7
SRRM4A7MD48 AC113412.1-201ENST00000425840 504 ntBASIC4.42□□□□□ -1.7
SRRM4A7MD48 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.42□□□□□ -1.7
SRRM4A7MD48 EIF2S2P3-201ENST00000428356 999 ntBASIC4.42□□□□□ -1.7
SRRM4A7MD48 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.42□□□□□ -1.7
SRRM4A7MD48 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.42□□□□□ -1.7
SRRM4A7MD48 MTND2P2-201ENST00000434633 945 ntBASIC4.42□□□□□ -1.7
SRRM4A7MD48 OR6D1P-201ENST00000436165 939 ntBASIC4.42□□□□□ -1.7
SRRM4A7MD48 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.42□□□□□ -1.7
SRRM4A7MD48 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.42□□□□□ -1.7
SRRM4A7MD48 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.42□□□□□ -1.7
SRRM4A7MD48 AL450996.1-201ENST00000445574 1202 ntBASIC4.42□□□□□ -1.7
SRRM4A7MD48 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.42□□□□□ -1.7
SRRM4A7MD48 AL450023.1-201ENST00000450868 751 ntBASIC4.42□□□□□ -1.7
SRRM4A7MD48 HMGB1P26-201ENST00000452520 628 ntBASIC4.42□□□□□ -1.7
SRRM4A7MD48 VDAC2P4-201ENST00000452925 711 ntBASIC4.42□□□□□ -1.7
SRRM4A7MD48 AL358876.1-201ENST00000453364 1075 ntBASIC4.42□□□□□ -1.7
SRRM4A7MD48 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC4.42□□□□□ -1.7
SRRM4A7MD48 AC026782.2-201ENST00000510845 636 ntBASIC4.42□□□□□ -1.7
SRRM4A7MD48 RNU6-1004P-201ENST00000516584 111 ntBASIC4.42□□□□□ -1.7
SRRM4A7MD48 SCARNA20.4-201ENST00000516969 131 ntBASIC4.42□□□□□ -1.7
SRRM4A7MD48 RNA5SP230-201ENST00000517039 122 ntBASIC4.42□□□□□ -1.7
SRRM4A7MD48 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SRRM4A7MD48 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.42□□□□□ -1.7
SRRM4A7MD48 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.42□□□□□ -1.7
SRRM4A7MD48 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.42□□□□□ -1.7
SRRM4A7MD48 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.42□□□□□ -1.7
SRRM4A7MD48 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.42□□□□□ -1.7
SRRM4A7MD48 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC4.42□□□□□ -1.7
SRRM4A7MD48 CR383656.14-201ENST00000551951 406 ntBASIC4.42□□□□□ -1.7
SRRM4A7MD48 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.42□□□□□ -1.7
SRRM4A7MD48 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.42□□□□□ -1.7
SRRM4A7MD48 MRPS21P7-201ENST00000566937 238 ntBASIC4.42□□□□□ -1.7
SRRM4A7MD48 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.42□□□□□ -1.7
SRRM4A7MD48 MIR4660-201ENST00000583549 74 ntBASIC4.42□□□□□ -1.7
SRRM4A7MD48 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC4.42□□□□□ -1.7
SRRM4A7MD48 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
SRRM4A7MD48 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC4.42□□□□□ -1.7
SRRM4A7MD48 AC027243.2-201ENST00000602530 724 ntBASIC4.42□□□□□ -1.7
SRRM4A7MD48 AL096712.1-201ENST00000614561 159 ntBASIC4.42□□□□□ -1.7
SRRM4A7MD48 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.42□□□□□ -1.7
SRRM4A7MD48 AC024023.1-201ENST00000624530 922 ntBASIC4.42□□□□□ -1.7
SRRM4A7MD48 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.42□□□□□ -1.7
SRRM4A7MD48 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SRRM4A7MD48 AC008691.1-209ENST00000642094 814 ntBASIC4.42□□□□□ -1.7
SRRM4A7MD48 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.42□□□□□ -1.7
SRRM4A7MD48 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
SRRM4A7MD48 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SRRM4A7MD48 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SRRM4A7MD48 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.42□□□□□ -1.7
SRRM4A7MD48 TCP1P3-201ENST00000414406 1498 ntBASIC4.42□□□□□ -1.7
SRRM4A7MD48 AC092376.2-201ENST00000622621 4116 ntBASIC4.42□□□□□ -1.7
SRRM4A7MD48 AC010329.2-201ENST00000595195 2737 ntBASIC4.42□□□□□ -1.7
SRRM4A7MD48 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SRRM4A7MD48 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SRRM4A7MD48 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.42□□□□□ -1.7
SRRM4A7MD48 HSPA8P17-201ENST00000427029 1382 ntBASIC4.41□□□□□ -1.7
SRRM4A7MD48 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
SRRM4A7MD48 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
SRRM4A7MD48 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms