Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 AC100757.1-201ENST00000616872 1835 ntBASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 OR55B1P-203ENST00000641518 2602 ntBASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 U3.7-201ENST00000363668 216 ntBASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 EI24P3-201ENST00000399046 1062 ntBASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 AC013410.2-201ENST00000422627 201 ntBASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 NANOGP4-201ENST00000427230 913 ntBASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 OR52B5P-201ENST00000435337 951 ntBASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 MTND4P15-201ENST00000437913 1033 ntBASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 AL359265.1-201ENST00000440296 795 ntBASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 AL163193.1-201ENST00000444895 788 ntBASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 RN7SL172P-201ENST00000460535 303 ntBASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 AC093827.1-201ENST00000480094 861 ntBASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 AC058823.1-201ENST00000485315 474 ntBASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 HIGD1AP14-201ENST00000507617 282 ntBASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 YWHABP2-201ENST00000540201 713 ntBASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 MTND2P17-201ENST00000550281 688 ntBASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 AC010503.3-201ENST00000594355 540 ntBASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 AC117490.2-201ENST00000610042 594 ntBASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 Z95327.3-201ENST00000610385 572 ntBASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 AC008833.1-201ENST00000611633 691 ntBASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 OR52B5P-202ENST00000641118 1110 ntBASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 AC003985.2-201ENST00000562268 1669 ntBASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SNX9Q9Y5X1 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 GVINP1-202ENST00000531871 7271 ntBASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 Y_RNA.110-201ENST00000363220 99 ntBASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 RNA5SP187-201ENST00000384400 119 ntBASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 MIR223-201ENST00000385204 110 ntBASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 AC108075.1-201ENST00000424692 529 ntBASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 AC245047.2-201ENST00000441060 530 ntBASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 AC104634.1-201ENST00000452720 462 ntBASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 AL049874.4-201ENST00000557593 255 ntBASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 AC069307.1-201ENST00000602820 447 ntBASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 AC009027.1-201ENST00000604510 479 ntBASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 AC244107.2-201ENST00000611773 76 ntBASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 AC009032.1-201ENST00000617574 431 ntBASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 AC020763.5-201ENST00000623298 430 ntBASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 AP002505.2-201ENST00000623585 696 ntBASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 AC011493.1-201ENST00000596753 1632 ntBASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 AL590763.1-201ENST00000398297 1545 ntBASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 OR51C1P-202ENST00000641159 1444 ntBASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SNX9Q9Y5X1 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms