Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 ZNF658B-201ENST00000602828 3408 ntBASIC6.62□□□□□ -1.35
COL4A3BPQ9Y5P4 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 SELENOWP1-201ENST00000322792 252 ntBASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 RNU1-150P-201ENST00000362491 162 ntBASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 RNU6-543P-201ENST00000362576 108 ntBASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 RNU6-249P-201ENST00000363016 102 ntBASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 USP9YP21-201ENST00000420603 432 ntBASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 AL035660.1-201ENST00000422041 222 ntBASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 AC246680.2-201ENST00000422106 389 ntBASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 MTCO1P53-201ENST00000441633 699 ntBASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 RPS7P3-201ENST00000443360 580 ntBASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 AL031313.1-201ENST00000448435 256 ntBASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 AC011476.1-201ENST00000466725 307 ntBASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 AC023050.1-201ENST00000498198 304 ntBASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 AC008629.2-201ENST00000503783 483 ntBASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 HPRT1P2-201ENST00000505250 544 ntBASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 AC008565.1-201ENST00000509046 885 ntBASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 LRRC6P1-201ENST00000532188 885 ntBASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 AC008521.2-201ENST00000591021 259 ntBASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 LSM1P2-201ENST00000604911 322 ntBASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 AL355974.3-201ENST00000617383 467 ntBASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 AC139769.3-201ENST00000618383 175 ntBASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 LGI1-209ENST00000627699 664 ntTSL 3 BASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 LINC01808-202ENST00000641680 1116 ntBASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 MRE11P1-201ENST00000464884 2127 ntBASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL4A3BPQ9Y5P4 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 OR52B3P-201ENST00000314715 928 ntBASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 TEX41-203ENST00000420472 765 ntTSL 3 BASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 AC092651.1-201ENST00000426110 312 ntBASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 MGAT2P2-201ENST00000427194 797 ntBASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 BX323845.3-201ENST00000428215 527 ntBASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 AL445928.1-201ENST00000435545 222 ntBASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 RPS3AP38-201ENST00000435889 763 ntBASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 Z80107.1-201ENST00000436830 412 ntBASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 FHP1-201ENST00000442741 703 ntBASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 AC068135.1-201ENST00000446164 246 ntBASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 AL050341.1-201ENST00000447743 313 ntBASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 AL935212.3-201ENST00000450729 284 ntBASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 AL354710.1-201ENST00000453641 246 ntBASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 RPL6P9-201ENST00000466502 859 ntBASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 TRBV5-2-201ENST00000489095 273 ntBASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 RN7SKP288-201ENST00000516227 268 ntBASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 RNU6-1028P-201ENST00000517164 93 ntBASIC6.6□□□□□ -1.35
COL4A3BPQ9Y5P4 AC091163.3-201ENST00000518269 1144 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms