Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC087575.1-201ENST00000585087 229 ntBASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 BNIP3P8-201ENST00000597863 560 ntBASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 AC012175.1-201ENST00000603755 531 ntBASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 WBP1LP12-201ENST00000604449 331 ntBASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 AC111186.1-201ENST00000604684 130 ntBASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 AC012603.1-201ENST00000606424 528 ntBASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 AL353726.1-201ENST00000614041 1000 ntBASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 ANKRD26P2-201ENST00000445530 1710 ntBASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 CCDC162P-202ENST00000368966 6751 ntBASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 AL391262.1-201ENST00000556558 1992 ntBASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 ATP5BP1-201ENST00000411980 1574 ntBASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 CTNNA1P1-201ENST00000515849 2728 ntBASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 AC017002.4-201ENST00000604721 1525 ntBASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 MTHFD2P5-201ENST00000320415 844 ntBASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 RNU5B-1-201ENST00000363286 116 ntBASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 RNU6-348P-201ENST00000384386 107 ntBASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 CCNG1P1-201ENST00000406783 885 ntBASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 MIR1275-201ENST00000408770 80 ntBASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 RN7SKP271-201ENST00000410528 320 ntBASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 CYCSP46-201ENST00000423569 204 ntBASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 VN1R42P-201ENST00000424651 344 ntBASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 DEFB130D-201ENST00000426866 237 ntBASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 PMCHL2-203ENST00000457791 237 ntBASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 AC013267.1-201ENST00000458227 267 ntBASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 AC026348.1-201ENST00000462549 1053 ntBASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 AC116337.2-201ENST00000477662 156 ntBASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 AC021087.2-201ENST00000504656 1203 ntBASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 AC093816.1-201ENST00000515076 913 ntBASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 RNU6-889P-201ENST00000517189 103 ntBASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 OR4A17P-201ENST00000526032 904 ntBASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 OR4A13P-201ENST00000529316 942 ntBASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 OLR1-209ENST00000543993 822 ntTSL 2 BASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 ARL2BPP2-201ENST00000550907 489 ntBASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 GNG2-203ENST00000553432 577 ntTSL 4 BASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 AC110588.1-201ENST00000559699 137 ntBASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 AC060780.3-201ENST00000589464 80 ntBASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 AC011921.2-201ENST00000589465 152 ntBASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 AC015871.2-201ENST00000603605 948 ntBASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 AP000894.4-201ENST00000610185 483 ntBASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 AC097641.3-201ENST00000613523 464 ntBASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 AC137056.2-201ENST00000624055 1958 ntBASIC8.72□□□□□ -1.01
PDZRN3Q9UPQ7 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC8.71□□□□□ -1.01
PDZRN3Q9UPQ7 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC8.71□□□□□ -1.01
PDZRN3Q9UPQ7 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC8.71□□□□□ -1.01
PDZRN3Q9UPQ7 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC8.71□□□□□ -1.01
PDZRN3Q9UPQ7 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.01
PDZRN3Q9UPQ7 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
PDZRN3Q9UPQ7 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
PDZRN3Q9UPQ7 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC8.71□□□□□ -1.01
PDZRN3Q9UPQ7 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
PDZRN3Q9UPQ7 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
PDZRN3Q9UPQ7 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 AC098592.2-201ENST00000413158 265 ntBASIC8.71□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms