Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 FTLP19-201ENST00000433300 394 ntBASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 GTF3AP5-201ENST00000442645 697 ntBASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 RPS4XP1-201ENST00000482189 787 ntBASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 MORF4L2P1-201ENST00000503761 858 ntBASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 OR4A46P-201ENST00000527255 933 ntBASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 AGGF1P9-201ENST00000561884 913 ntBASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 IMMP1LP3-201ENST00000604197 224 ntBASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 AL034374.2-201ENST00000605281 548 ntBASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 AC011447.7-201ENST00000624228 1590 ntBASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.86□□□□□ -1.63
VPS29Q9UBQ0 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VPS29Q9UBQ0 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VPS29Q9UBQ0 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VPS29Q9UBQ0 U3.2-201ENST00000362981 210 ntBASIC4.85□□□□□ -1.63
VPS29Q9UBQ0 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VPS29Q9UBQ0 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VPS29Q9UBQ0 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VPS29Q9UBQ0 DUTP5-201ENST00000406790 469 ntBASIC4.85□□□□□ -1.63
VPS29Q9UBQ0 AL512422.1-201ENST00000407033 553 ntBASIC4.85□□□□□ -1.63
VPS29Q9UBQ0 RN7SKP114-201ENST00000410327 279 ntBASIC4.85□□□□□ -1.63
VPS29Q9UBQ0 CHEK2P5-201ENST00000423877 246 ntBASIC4.85□□□□□ -1.63
VPS29Q9UBQ0 OR52B5P-201ENST00000435337 951 ntBASIC4.85□□□□□ -1.63
VPS29Q9UBQ0 AL391987.1-201ENST00000441025 200 ntBASIC4.85□□□□□ -1.63
VPS29Q9UBQ0 TXNP5-201ENST00000441043 315 ntBASIC4.85□□□□□ -1.63
VPS29Q9UBQ0 AC093166.2-201ENST00000455969 1017 ntBASIC4.85□□□□□ -1.63
VPS29Q9UBQ0 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.85□□□□□ -1.63
VPS29Q9UBQ0 AP006245.2-201ENST00000522004 300 ntBASIC4.85□□□□□ -1.63
VPS29Q9UBQ0 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.85□□□□□ -1.63
VPS29Q9UBQ0 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.85□□□□□ -1.63
VPS29Q9UBQ0 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS29Q9UBQ0 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS29Q9UBQ0 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.85□□□□□ -1.63
VPS29Q9UBQ0 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS29Q9UBQ0 AC011445.2-201ENST00000599274 173 ntBASIC4.85□□□□□ -1.63
VPS29Q9UBQ0 AC138965.3-201ENST00000623875 498 ntBASIC4.85□□□□□ -1.63
VPS29Q9UBQ0 OR52B5P-202ENST00000641118 1110 ntBASIC4.85□□□□□ -1.63
VPS29Q9UBQ0 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VPS29Q9UBQ0 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.85□□□□□ -1.63
VPS29Q9UBQ0 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VPS29Q9UBQ0 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VPS29Q9UBQ0 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VPS29Q9UBQ0 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.85□□□□□ -1.63
VPS29Q9UBQ0 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.85□□□□□ -1.63
VPS29Q9UBQ0 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
VPS29Q9UBQ0 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VPS29Q9UBQ0 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VPS29Q9UBQ0 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.84□□□□□ -1.63
VPS29Q9UBQ0 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
VPS29Q9UBQ0 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VPS29Q9UBQ0 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VPS29Q9UBQ0 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
VPS29Q9UBQ0 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
VPS29Q9UBQ0 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.84□□□□□ -1.63
VPS29Q9UBQ0 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
VPS29Q9UBQ0 AC019072.1-201ENST00000604535 1551 ntBASIC4.84□□□□□ -1.63
VPS29Q9UBQ0 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
VPS29Q9UBQ0 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VPS29Q9UBQ0 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.84□□□□□ -1.63
VPS29Q9UBQ0 RN7SKP126-201ENST00000411143 300 ntBASIC4.84□□□□□ -1.63
VPS29Q9UBQ0 AL121878.1-201ENST00000418638 859 ntBASIC4.84□□□□□ -1.63
VPS29Q9UBQ0 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.84□□□□□ -1.63
VPS29Q9UBQ0 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.84□□□□□ -1.63
VPS29Q9UBQ0 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.84□□□□□ -1.63
VPS29Q9UBQ0 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.84□□□□□ -1.63
VPS29Q9UBQ0 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.84□□□□□ -1.63
VPS29Q9UBQ0 AC012512.1-201ENST00000446594 718 ntBASIC4.84□□□□□ -1.63
VPS29Q9UBQ0 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.84□□□□□ -1.63
VPS29Q9UBQ0 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.84□□□□□ -1.63
VPS29Q9UBQ0 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VPS29Q9UBQ0 RN7SL101P-201ENST00000496350 279 ntBASIC4.84□□□□□ -1.63
VPS29Q9UBQ0 AC138409.2-202ENST00000507274 458 ntBASIC4.84□□□□□ -1.63
VPS29Q9UBQ0 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VPS29Q9UBQ0 RPL23AP53-201ENST00000521854 457 ntBASIC4.84□□□□□ -1.63
VPS29Q9UBQ0 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.84□□□□□ -1.63
VPS29Q9UBQ0 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.84□□□□□ -1.63
VPS29Q9UBQ0 AC116553.2-201ENST00000564203 463 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms