Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 RPS4XP12-201ENST00000461747 709 ntBASIC5.91□□□□□ -1.46
DKK3Q9UBP4 AC022336.1-201ENST00000475510 337 ntBASIC5.91□□□□□ -1.46
DKK3Q9UBP4 STRADBP1-201ENST00000478954 1281 ntBASIC5.91□□□□□ -1.46
DKK3Q9UBP4 OR11I1P-201ENST00000486033 954 ntBASIC5.91□□□□□ -1.46
DKK3Q9UBP4 AC020699.1-201ENST00000505161 445 ntBASIC5.91□□□□□ -1.46
DKK3Q9UBP4 MTCO1P31-201ENST00000506355 492 ntBASIC5.91□□□□□ -1.46
DKK3Q9UBP4 AC112518.2-201ENST00000508565 425 ntBASIC5.91□□□□□ -1.46
DKK3Q9UBP4 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC5.91□□□□□ -1.46
DKK3Q9UBP4 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.91□□□□□ -1.46
DKK3Q9UBP4 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.91□□□□□ -1.46
DKK3Q9UBP4 AC010476.1-201ENST00000519111 851 ntBASIC5.91□□□□□ -1.46
DKK3Q9UBP4 HMGB1P46-201ENST00000520062 610 ntBASIC5.91□□□□□ -1.46
DKK3Q9UBP4 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.91□□□□□ -1.46
DKK3Q9UBP4 OR4A17P-201ENST00000526032 904 ntBASIC5.91□□□□□ -1.46
DKK3Q9UBP4 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.91□□□□□ -1.46
DKK3Q9UBP4 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.91□□□□□ -1.46
DKK3Q9UBP4 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC5.91□□□□□ -1.46
DKK3Q9UBP4 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.91□□□□□ -1.46
DKK3Q9UBP4 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC5.91□□□□□ -1.46
DKK3Q9UBP4 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.91□□□□□ -1.46
DKK3Q9UBP4 GARSP1-201ENST00000570895 719 ntBASIC5.91□□□□□ -1.46
DKK3Q9UBP4 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC5.91□□□□□ -1.46
DKK3Q9UBP4 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.91□□□□□ -1.46
DKK3Q9UBP4 AC010503.3-201ENST00000594355 540 ntBASIC5.91□□□□□ -1.46
DKK3Q9UBP4 NIFKP6-201ENST00000598115 845 ntBASIC5.91□□□□□ -1.46
DKK3Q9UBP4 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.91□□□□□ -1.46
DKK3Q9UBP4 FAM27E4-201ENST00000605259 342 ntBASIC5.91□□□□□ -1.46
DKK3Q9UBP4 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.91□□□□□ -1.46
DKK3Q9UBP4 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.91□□□□□ -1.46
DKK3Q9UBP4 AC006840.1-201ENST00000623069 542 ntBASIC5.91□□□□□ -1.46
DKK3Q9UBP4 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
DKK3Q9UBP4 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
DKK3Q9UBP4 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.91□□□□□ -1.46
DKK3Q9UBP4 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
DKK3Q9UBP4 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
DKK3Q9UBP4 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.91□□□□□ -1.46
DKK3Q9UBP4 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
DKK3Q9UBP4 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
DKK3Q9UBP4 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
DKK3Q9UBP4 AC106872.5-201ENST00000508856 1416 ntBASIC5.91□□□□□ -1.46
DKK3Q9UBP4 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
DKK3Q9UBP4 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.9□□□□□ -1.46
DKK3Q9UBP4 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
DKK3Q9UBP4 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
DKK3Q9UBP4 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
DKK3Q9UBP4 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
DKK3Q9UBP4 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
DKK3Q9UBP4 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
DKK3Q9UBP4 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.46
DKK3Q9UBP4 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.9□□□□□ -1.46
DKK3Q9UBP4 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.9□□□□□ -1.46
DKK3Q9UBP4 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
DKK3Q9UBP4 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
DKK3Q9UBP4 AC091305.2-201ENST00000624049 1576 ntBASIC5.9□□□□□ -1.46
DKK3Q9UBP4 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
DKK3Q9UBP4 MIR375-201ENST00000362103 64 ntBASIC5.9□□□□□ -1.46
DKK3Q9UBP4 MIR16-2-201ENST00000362117 81 ntBASIC5.9□□□□□ -1.46
DKK3Q9UBP4 RN7SKP28-201ENST00000364770 305 ntBASIC5.9□□□□□ -1.46
DKK3Q9UBP4 RN7SKP292-201ENST00000365522 317 ntBASIC5.9□□□□□ -1.46
DKK3Q9UBP4 TAS2R15P-201ENST00000390674 928 ntBASIC5.9□□□□□ -1.46
DKK3Q9UBP4 MTND4P13-201ENST00000402078 1023 ntBASIC5.9□□□□□ -1.46
DKK3Q9UBP4 RN7SKP29-201ENST00000410957 272 ntBASIC5.9□□□□□ -1.46
DKK3Q9UBP4 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.9□□□□□ -1.46
DKK3Q9UBP4 AC241520.1-201ENST00000422654 1099 ntBASIC5.9□□□□□ -1.46
DKK3Q9UBP4 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.9□□□□□ -1.46
DKK3Q9UBP4 HSPE1P16-201ENST00000426640 348 ntBASIC5.9□□□□□ -1.46
DKK3Q9UBP4 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.9□□□□□ -1.46
DKK3Q9UBP4 MTND2P5-201ENST00000432656 1006 ntBASIC5.9□□□□□ -1.46
DKK3Q9UBP4 DEFA9P-201ENST00000433042 285 ntBASIC5.9□□□□□ -1.46
DKK3Q9UBP4 AL035246.1-201ENST00000433554 1255 ntBASIC5.9□□□□□ -1.46
DKK3Q9UBP4 MTCYBP31-201ENST00000438855 1122 ntBASIC5.9□□□□□ -1.46
DKK3Q9UBP4 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.9□□□□□ -1.46
DKK3Q9UBP4 Z83846.1-201ENST00000446798 265 ntBASIC5.9□□□□□ -1.46
DKK3Q9UBP4 EIF2S2P2-201ENST00000447161 982 ntBASIC5.9□□□□□ -1.46
DKK3Q9UBP4 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.9□□□□□ -1.46
DKK3Q9UBP4 AC008379.1-201ENST00000463655 464 ntBASIC5.9□□□□□ -1.46
DKK3Q9UBP4 RPL38P3-201ENST00000484463 213 ntBASIC5.9□□□□□ -1.46
DKK3Q9UBP4 PPIAP19-201ENST00000486414 492 ntBASIC5.9□□□□□ -1.46
DKK3Q9UBP4 PPM1AP1-201ENST00000502740 1135 ntBASIC5.9□□□□□ -1.46
DKK3Q9UBP4 NENFP3-201ENST00000503735 313 ntBASIC5.9□□□□□ -1.46
DKK3Q9UBP4 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC5.9□□□□□ -1.46
DKK3Q9UBP4 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
DKK3Q9UBP4 AC008638.1-201ENST00000506035 866 ntBASIC5.9□□□□□ -1.46
DKK3Q9UBP4 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
DKK3Q9UBP4 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.9□□□□□ -1.46
DKK3Q9UBP4 RNU6-319P-201ENST00000516025 108 ntBASIC5.9□□□□□ -1.46
DKK3Q9UBP4 RN7SKP288-201ENST00000516227 268 ntBASIC5.9□□□□□ -1.46
DKK3Q9UBP4 SNORA70.20-201ENST00000516848 126 ntBASIC5.9□□□□□ -1.46
DKK3Q9UBP4 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
DKK3Q9UBP4 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.9□□□□□ -1.46
DKK3Q9UBP4 AC091515.1-201ENST00000548110 679 ntBASIC5.9□□□□□ -1.46
DKK3Q9UBP4 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.9□□□□□ -1.46
DKK3Q9UBP4 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.9□□□□□ -1.46
DKK3Q9UBP4 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.9□□□□□ -1.46
DKK3Q9UBP4 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.9□□□□□ -1.46
DKK3Q9UBP4 AC234772.3-201ENST00000602277 528 ntBASIC5.9□□□□□ -1.46
DKK3Q9UBP4 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.9□□□□□ -1.46
DKK3Q9UBP4 AC022022.2-201ENST00000602989 360 ntBASIC5.9□□□□□ -1.46
DKK3Q9UBP4 AC026741.1-201ENST00000605892 482 ntBASIC5.9□□□□□ -1.46
DKK3Q9UBP4 AL136295.6-201ENST00000610486 658 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms