Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 UTY-215ENST00000618474 6277 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHD7Q9P2D1 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CHD7Q9P2D1 UQCRBP1-201ENST00000421129 336 ntBASIC5.07□□□□□ -1.6
CHD7Q9P2D1 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.07□□□□□ -1.6
CHD7Q9P2D1 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.07□□□□□ -1.6
CHD7Q9P2D1 AC084783.1-201ENST00000565846 910 ntBASIC5.07□□□□□ -1.6
CHD7Q9P2D1 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.07□□□□□ -1.6
CHD7Q9P2D1 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.07□□□□□ -1.6
CHD7Q9P2D1 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.07□□□□□ -1.6
CHD7Q9P2D1 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.07□□□□□ -1.6
CHD7Q9P2D1 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CHD7Q9P2D1 AC090220.1-201ENST00000593078 1699 ntBASIC5.07□□□□□ -1.6
CHD7Q9P2D1 JPX-212ENST00000639185 9658 ntTSL 5 BASIC5.07□□□□□ -1.6
CHD7Q9P2D1 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHD7Q9P2D1 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC5.07□□□□□ -1.6
CHD7Q9P2D1 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHD7Q9P2D1 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CHD7Q9P2D1 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHD7Q9P2D1 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CHD7Q9P2D1 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CHD7Q9P2D1 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CHD7Q9P2D1 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CHD7Q9P2D1 AC092651.1-201ENST00000426110 312 ntBASIC5.07□□□□□ -1.6
CHD7Q9P2D1 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.07□□□□□ -1.6
CHD7Q9P2D1 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.07□□□□□ -1.6
CHD7Q9P2D1 OR8R1P-201ENST00000543943 764 ntBASIC5.07□□□□□ -1.6
CHD7Q9P2D1 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CHD7Q9P2D1 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CHD7Q9P2D1 AP001029.2-203ENST00000589795 4910 ntBASIC5.06□□□□□ -1.6
CHD7Q9P2D1 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CHD7Q9P2D1 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHD7Q9P2D1 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CHD7Q9P2D1 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.06□□□□□ -1.6
CHD7Q9P2D1 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHD7Q9P2D1 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.06□□□□□ -1.6
CHD7Q9P2D1 AC006058.1-201ENST00000568686 5067 ntBASIC5.06□□□□□ -1.6
CHD7Q9P2D1 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHD7Q9P2D1 OR9K1P-202ENST00000641111 3217 ntBASIC5.06□□□□□ -1.6
CHD7Q9P2D1 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHD7Q9P2D1 SNORD46.1-201ENST00000364139 104 ntBASIC5.06□□□□□ -1.6
CHD7Q9P2D1 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.06□□□□□ -1.6
CHD7Q9P2D1 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.06□□□□□ -1.6
CHD7Q9P2D1 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.06□□□□□ -1.6
CHD7Q9P2D1 MIR5699-201ENST00000578903 90 ntBASIC5.06□□□□□ -1.6
CHD7Q9P2D1 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
CHD7Q9P2D1 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHD7Q9P2D1 AC068769.1-201ENST00000474767 2426 ntBASIC5.06□□□□□ -1.6
CHD7Q9P2D1 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHD7Q9P2D1 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHD7Q9P2D1 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.06□□□□□ -1.6
CHD7Q9P2D1 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHD7Q9P2D1 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CHD7Q9P2D1 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHD7Q9P2D1 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CHD7Q9P2D1 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.06□□□□□ -1.6
CHD7Q9P2D1 SOCS5P3-201ENST00000425115 1576 ntBASIC5.06□□□□□ -1.6
CHD7Q9P2D1 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CHD7Q9P2D1 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.06□□□□□ -1.6
CHD7Q9P2D1 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CHD7Q9P2D1 CEACAMP8-201ENST00000413902 580 ntBASIC5.06□□□□□ -1.6
CHD7Q9P2D1 AL450023.3-201ENST00000440592 271 ntBASIC5.06□□□□□ -1.6
CHD7Q9P2D1 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.06□□□□□ -1.6
CHD7Q9P2D1 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.06□□□□□ -1.6
CHD7Q9P2D1 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.06□□□□□ -1.6
CHD7Q9P2D1 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.06□□□□□ -1.6
CHD7Q9P2D1 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.06□□□□□ -1.6
CHD7Q9P2D1 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.06□□□□□ -1.6
CHD7Q9P2D1 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC5.06□□□□□ -1.6
CHD7Q9P2D1 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CHD7Q9P2D1 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
CHD7Q9P2D1 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CHD7Q9P2D1 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CHD7Q9P2D1 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.05□□□□□ -1.6
CHD7Q9P2D1 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.05□□□□□ -1.6
CHD7Q9P2D1 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC5.05□□□□□ -1.6
CHD7Q9P2D1 AC108359.1-201ENST00000616451 1211 ntBASIC5.05□□□□□ -1.6
CHD7Q9P2D1 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CHD7Q9P2D1 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.05□□□□□ -1.6
CHD7Q9P2D1 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.05□□□□□ -1.6
CHD7Q9P2D1 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CHD7Q9P2D1 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
CHD7Q9P2D1 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
CHD7Q9P2D1 TBC1D30-204ENST00000542120 7433 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CHD7Q9P2D1 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.05□□□□□ -1.6
CHD7Q9P2D1 Y_RNA.333-201ENST00000365274 102 ntBASIC5.05□□□□□ -1.6
CHD7Q9P2D1 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CHD7Q9P2D1 AC009238.2-201ENST00000431026 355 ntBASIC5.05□□□□□ -1.6
CHD7Q9P2D1 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.05□□□□□ -1.6
CHD7Q9P2D1 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.05□□□□□ -1.6
CHD7Q9P2D1 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.05□□□□□ -1.6
CHD7Q9P2D1 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.05□□□□□ -1.6
CHD7Q9P2D1 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.05□□□□□ -1.6
CHD7Q9P2D1 BCLAF3-203ENST00000379687 6528 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
CHD7Q9P2D1 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
CHD7Q9P2D1 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
CHD7Q9P2D1 ZBTB40-201ENST00000374651 8368 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CHD7Q9P2D1 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CHD7Q9P2D1 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CHD7Q9P2D1 AL356387.2-201ENST00000422272 243 ntBASIC5.04□□□□□ -1.6
CHD7Q9P2D1 SCAND3P1-201ENST00000439854 1060 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms