Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC099654.6-201ENST00000636487 512 ntBASIC4.89□□□□□ -1.63
CCDC88CQ9P219 SAMMSON-227ENST00000642114 1199 ntBASIC4.89□□□□□ -1.63
CCDC88CQ9P219 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.89□□□□□ -1.63
CCDC88CQ9P219 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.89□□□□□ -1.63
CCDC88CQ9P219 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CCDC88CQ9P219 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CCDC88CQ9P219 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.88□□□□□ -1.63
CCDC88CQ9P219 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC88CQ9P219 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC88CQ9P219 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC88CQ9P219 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC88CQ9P219 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC88CQ9P219 RNA5SP241-201ENST00000391326 114 ntBASIC4.88□□□□□ -1.63
CCDC88CQ9P219 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.88□□□□□ -1.63
CCDC88CQ9P219 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC88CQ9P219 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.88□□□□□ -1.63
CCDC88CQ9P219 AL356981.1-201ENST00000454879 684 ntBASIC4.88□□□□□ -1.63
CCDC88CQ9P219 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.88□□□□□ -1.63
CCDC88CQ9P219 AC021660.1-201ENST00000465006 554 ntBASIC4.88□□□□□ -1.63
CCDC88CQ9P219 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC88CQ9P219 AC008897.1-201ENST00000494006 347 ntBASIC4.88□□□□□ -1.63
CCDC88CQ9P219 BRD9P1-201ENST00000529855 560 ntBASIC4.88□□□□□ -1.63
CCDC88CQ9P219 AL359219.2-201ENST00000555184 348 ntBASIC4.88□□□□□ -1.63
CCDC88CQ9P219 AC040958.1-201ENST00000561102 201 ntBASIC4.88□□□□□ -1.63
CCDC88CQ9P219 AC063976.2-201ENST00000425667 3556 ntBASIC4.88□□□□□ -1.63
CCDC88CQ9P219 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC88CQ9P219 AC073429.2-201ENST00000569694 1444 ntBASIC4.88□□□□□ -1.63
CCDC88CQ9P219 AL031123.3-201ENST00000623345 1837 ntBASIC4.88□□□□□ -1.63
CCDC88CQ9P219 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC88CQ9P219 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC88CQ9P219 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC88CQ9P219 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC88CQ9P219 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC88CQ9P219 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CCDC88CQ9P219 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC88CQ9P219 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC88CQ9P219 RN7SKP115-201ENST00000363177 317 ntBASIC4.87□□□□□ -1.63
CCDC88CQ9P219 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC88CQ9P219 AC093655.2-201ENST00000425735 631 ntBASIC4.87□□□□□ -1.63
CCDC88CQ9P219 GAPDHP14-201ENST00000450472 937 ntBASIC4.87□□□□□ -1.63
CCDC88CQ9P219 EIF1P7-201ENST00000487533 337 ntBASIC4.87□□□□□ -1.63
CCDC88CQ9P219 AL049874.2-201ENST00000492636 288 ntBASIC4.87□□□□□ -1.63
CCDC88CQ9P219 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC88CQ9P219 COX6B1P5-201ENST00000509843 249 ntBASIC4.87□□□□□ -1.63
CCDC88CQ9P219 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.87□□□□□ -1.63
CCDC88CQ9P219 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC88CQ9P219 CR381572.2-201ENST00000624852 397 ntBASIC4.87□□□□□ -1.63
CCDC88CQ9P219 FRG1EP-201ENST00000634469 770 ntBASIC4.87□□□□□ -1.63
CCDC88CQ9P219 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.87□□□□□ -1.63
CCDC88CQ9P219 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC88CQ9P219 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC88CQ9P219 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC88CQ9P219 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC88CQ9P219 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC88CQ9P219 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC88CQ9P219 AC006210.2-201ENST00000367074 1545 ntBASIC4.87□□□□□ -1.63
CCDC88CQ9P219 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC4.87□□□□□ -1.63
CCDC88CQ9P219 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC88CQ9P219 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC88CQ9P219 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.87□□□□□ -1.63
CCDC88CQ9P219 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC88CQ9P219 CASC19-281ENST00000642118 1554 ntBASIC4.87□□□□□ -1.63
CCDC88CQ9P219 AL035419.1-201ENST00000397037 564 ntBASIC4.87□□□□□ -1.63
CCDC88CQ9P219 PEX12P1-201ENST00000400284 1048 ntBASIC4.87□□□□□ -1.63
CCDC88CQ9P219 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC88CQ9P219 RN7SL443P-201ENST00000464331 290 ntBASIC4.87□□□□□ -1.63
CCDC88CQ9P219 AC105233.1-201ENST00000498840 781 ntBASIC4.87□□□□□ -1.63
CCDC88CQ9P219 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC88CQ9P219 GLUD1P3-202ENST00000508551 200 ntBASIC4.87□□□□□ -1.63
CCDC88CQ9P219 OR7H2P-201ENST00000513483 306 ntBASIC4.87□□□□□ -1.63
CCDC88CQ9P219 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC88CQ9P219 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.87□□□□□ -1.63
CCDC88CQ9P219 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC88CQ9P219 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC88CQ9P219 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC88CQ9P219 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.87□□□□□ -1.63
CCDC88CQ9P219 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC88CQ9P219 AL137141.1-201ENST00000624622 4836 ntBASIC4.87□□□□□ -1.63
CCDC88CQ9P219 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC88CQ9P219 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC88CQ9P219 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
CCDC88CQ9P219 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC88CQ9P219 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC88CQ9P219 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC88CQ9P219 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC88CQ9P219 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC88CQ9P219 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC88CQ9P219 SMG1P7-201ENST00000565246 2704 ntBASIC4.86□□□□□ -1.63
CCDC88CQ9P219 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC88CQ9P219 RNA5SP428-201ENST00000365129 132 ntBASIC4.86□□□□□ -1.63
CCDC88CQ9P219 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CCDC88CQ9P219 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC88CQ9P219 AL358178.1-201ENST00000407698 397 ntBASIC4.86□□□□□ -1.63
CCDC88CQ9P219 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC88CQ9P219 MGAT2P2-201ENST00000427194 797 ntBASIC4.86□□□□□ -1.63
CCDC88CQ9P219 AC090018.1-201ENST00000434369 367 ntBASIC4.86□□□□□ -1.63
CCDC88CQ9P219 RPS29P10-201ENST00000439197 166 ntBASIC4.86□□□□□ -1.63
CCDC88CQ9P219 AC092647.3-201ENST00000443044 633 ntBASIC4.86□□□□□ -1.63
CCDC88CQ9P219 AC245028.2-201ENST00000458673 253 ntBASIC4.86□□□□□ -1.63
CCDC88CQ9P219 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms