Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 AL359976.1-201ENST00000418655 3528 ntBASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 RNU6-560P-201ENST00000364007 108 ntBASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 RNA5SP478-201ENST00000364657 115 ntBASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 Y_RNA.318-201ENST00000365131 97 ntBASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 RNU6-157P-201ENST00000383957 107 ntBASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 MIR188-201ENST00000385034 86 ntBASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 TAF9BP1-201ENST00000396646 746 ntBASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 RN7SKP166-201ENST00000410812 305 ntBASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 AC016907.1-201ENST00000419483 435 ntBASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 AP001324.1-201ENST00000428553 399 ntBASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 AC094019.1-201ENST00000434678 472 ntBASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 CYCSP11-201ENST00000436426 315 ntBASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 MTCYBP34-201ENST00000439552 670 ntBASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 DNAJC19P8-201ENST00000452887 259 ntBASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 RN7SL326P-201ENST00000477493 296 ntBASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 AC073522.1-201ENST00000483312 377 ntBASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 LINC00888-204ENST00000487386 421 ntBASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 AC112484.3-201ENST00000505910 329 ntBASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 RNA5SP206-201ENST00000516703 121 ntBASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 IGKV2D-10-201ENST00000520194 281 ntBASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 AP001317.1-201ENST00000531194 960 ntBASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 AP000619.3-201ENST00000535634 1127 ntBASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 AC084824.1-201ENST00000550917 1005 ntBASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 AL121579.2-201ENST00000555466 590 ntBASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 DUXAP1-201ENST00000556632 463 ntBASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 NIFKP8-201ENST00000560500 874 ntBASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 AL078601.3-201ENST00000573303 535 ntBASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 AL135999.3-201ENST00000610501 812 ntBASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 AL354976.1-201ENST00000613843 387 ntBASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 AL353726.1-201ENST00000614041 1000 ntBASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 AC121761.2-201ENST00000617300 689 ntBASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 AC006840.1-201ENST00000623069 542 ntBASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 AC027575.3-201ENST00000583058 2747 ntBASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
TRIM39Q9HCM9 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM39Q9HCM9 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
TRIM39Q9HCM9 ELL2P3-201ENST00000457883 1602 ntBASIC6.25□□□□□ -1.41
TRIM39Q9HCM9 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.25□□□□□ -1.41
TRIM39Q9HCM9 AC093311.1-201ENST00000506586 2021 ntBASIC6.25□□□□□ -1.41
TRIM39Q9HCM9 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
TRIM39Q9HCM9 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM39Q9HCM9 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM39Q9HCM9 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
TRIM39Q9HCM9 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM39Q9HCM9 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM39Q9HCM9 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM39Q9HCM9 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM39Q9HCM9 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM39Q9HCM9 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM39Q9HCM9 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
TRIM39Q9HCM9 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.25□□□□□ -1.41
TRIM39Q9HCM9 STAG3L4-201ENST00000352103 530 ntBASIC6.25□□□□□ -1.41
TRIM39Q9HCM9 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
TRIM39Q9HCM9 OR52E6-202ENST00000379946 954 ntBASIC6.25□□□□□ -1.41
TRIM39Q9HCM9 MIR137-201ENST00000385223 102 ntBASIC6.25□□□□□ -1.41
TRIM39Q9HCM9 SNORA11C-201ENST00000408532 129 ntBASIC6.25□□□□□ -1.41
TRIM39Q9HCM9 RNU6-77P-201ENST00000410554 91 ntBASIC6.25□□□□□ -1.41
TRIM39Q9HCM9 NME1P1-201ENST00000420914 382 ntBASIC6.25□□□□□ -1.41
TRIM39Q9HCM9 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC6.25□□□□□ -1.41
TRIM39Q9HCM9 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM39Q9HCM9 AC112492.2-201ENST00000432774 1030 ntBASIC6.25□□□□□ -1.41
TRIM39Q9HCM9 AL451136.1-201ENST00000435399 325 ntBASIC6.25□□□□□ -1.41
TRIM39Q9HCM9 YWHAZP7-201ENST00000436906 631 ntBASIC6.25□□□□□ -1.41
TRIM39Q9HCM9 AC092393.1-201ENST00000439625 742 ntBASIC6.25□□□□□ -1.41
TRIM39Q9HCM9 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC6.25□□□□□ -1.41
TRIM39Q9HCM9 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM39Q9HCM9 AL645936.1-201ENST00000441979 518 ntBASIC6.25□□□□□ -1.41
TRIM39Q9HCM9 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms