Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
FOXP3Q9BZS1 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.62□□□□□ -1.35
FOXP3Q9BZS1 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
FOXP3Q9BZS1 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
FOXP3Q9BZS1 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
FOXP3Q9BZS1 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
FOXP3Q9BZS1 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
FOXP3Q9BZS1 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
FOXP3Q9BZS1 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
FOXP3Q9BZS1 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
FOXP3Q9BZS1 AL078595.2-201ENST00000605309 1780 ntBASIC6.62□□□□□ -1.35
FOXP3Q9BZS1 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.62□□□□□ -1.35
FOXP3Q9BZS1 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 AC017007.4-201ENST00000503353 1352 ntBASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 RNA5SP232-201ENST00000364144 119 ntBASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 Y_RNA.465-201ENST00000384293 102 ntBASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 Y_RNA.517-201ENST00000384551 106 ntBASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 RPL23AP17-201ENST00000401064 499 ntBASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 DNAJC19P6-201ENST00000401853 280 ntBASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 AL031577.2-201ENST00000404133 280 ntBASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 AL133264.1-201ENST00000407157 562 ntBASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 RPS26P38-201ENST00000414476 348 ntBASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 UBE2V1P14-201ENST00000415815 558 ntBASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 SETP9-201ENST00000423837 832 ntBASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 Z74696.2-201ENST00000436514 498 ntBASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 SUN3-208ENST00000453192 801 ntTSL 5 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 AKR1D1P1-201ENST00000457236 936 ntBASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 AC104685.1-201ENST00000502445 371 ntBASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 LTV1P1-201ENST00000510683 1237 ntBASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 AC106800.3-201ENST00000511389 308 ntBASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 AL133241.1-201ENST00000556832 487 ntBASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 RN7SL208P-201ENST00000577964 296 ntBASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 RPL29P33-201ENST00000587474 316 ntBASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 AC096553.1-201ENST00000605169 829 ntBASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 AC105227.2-201ENST00000615075 605 ntBASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 uc_338.29-201ENST00000615099 168 ntBASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 MIR7854-201ENST00000620068 65 ntBASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 AC089999.3-201ENST00000622440 577 ntBASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 AC109454.4-201ENST00000623411 649 ntBASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
FOXP3Q9BZS1 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms