Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 PACRG-210ENST00000611387 279 ntTSL 5 BASIC7.2□□□□□ -1.26
CHMP4AQ9BY43 AC007342.8-201ENST00000623278 678 ntBASIC7.2□□□□□ -1.26
CHMP4AQ9BY43 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
CHMP4AQ9BY43 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC7.2□□□□□ -1.26
CHMP4AQ9BY43 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
CHMP4AQ9BY43 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CHMP4AQ9BY43 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
CHMP4AQ9BY43 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
CHMP4AQ9BY43 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC7.2□□□□□ -1.26
CHMP4AQ9BY43 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CHMP4AQ9BY43 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
CHMP4AQ9BY43 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
CHMP4AQ9BY43 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
CHMP4AQ9BY43 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC7.19□□□□□ -1.26
CHMP4AQ9BY43 AC083799.1-201ENST00000366451 910 ntBASIC7.19□□□□□ -1.26
CHMP4AQ9BY43 RN7SKP247-201ENST00000411094 308 ntBASIC7.19□□□□□ -1.26
CHMP4AQ9BY43 EIF4A1P6-201ENST00000448133 1210 ntBASIC7.19□□□□□ -1.26
CHMP4AQ9BY43 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC7.19□□□□□ -1.26
CHMP4AQ9BY43 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC7.19□□□□□ -1.26
CHMP4AQ9BY43 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC7.19□□□□□ -1.26
CHMP4AQ9BY43 CDH12P2-201ENST00000504393 298 ntBASIC7.19□□□□□ -1.26
CHMP4AQ9BY43 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CHMP4AQ9BY43 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC7.19□□□□□ -1.26
CHMP4AQ9BY43 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC7.19□□□□□ -1.26
CHMP4AQ9BY43 RPL7L1P4-201ENST00000513004 707 ntBASIC7.19□□□□□ -1.26
CHMP4AQ9BY43 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC7.19□□□□□ -1.26
CHMP4AQ9BY43 AC137627.1-201ENST00000545761 289 ntBASIC7.19□□□□□ -1.26
CHMP4AQ9BY43 HNRNPCP1-201ENST00000556181 766 ntBASIC7.19□□□□□ -1.26
CHMP4AQ9BY43 AC018552.3-201ENST00000567416 561 ntBASIC7.19□□□□□ -1.26
CHMP4AQ9BY43 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC7.19□□□□□ -1.26
CHMP4AQ9BY43 AC022884.3-201ENST00000579571 248 ntBASIC7.19□□□□□ -1.26
CHMP4AQ9BY43 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC7.19□□□□□ -1.26
CHMP4AQ9BY43 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC7.19□□□□□ -1.26
CHMP4AQ9BY43 MIR3176-201ENST00000582210 90 ntBASIC7.19□□□□□ -1.26
CHMP4AQ9BY43 AC012616.1-201ENST00000600294 197 ntBASIC7.19□□□□□ -1.26
CHMP4AQ9BY43 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC7.19□□□□□ -1.26
CHMP4AQ9BY43 LINC00216-201ENST00000623548 1126 ntBASIC7.19□□□□□ -1.26
CHMP4AQ9BY43 AC132068.1-201ENST00000623805 459 ntBASIC7.19□□□□□ -1.26
CHMP4AQ9BY43 SELE-204ENST00000367776 3576 ntTSL 5 BASIC7.19□□□□□ -1.26
CHMP4AQ9BY43 SELE-205ENST00000367777 3576 ntTSL 5 BASIC7.19□□□□□ -1.26
CHMP4AQ9BY43 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
CHMP4AQ9BY43 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CHMP4AQ9BY43 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CHMP4AQ9BY43 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CHMP4AQ9BY43 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
CHMP4AQ9BY43 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
CHMP4AQ9BY43 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CHMP4AQ9BY43 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC7.18□□□□□ -1.26
CHMP4AQ9BY43 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC7.18□□□□□ -1.26
CHMP4AQ9BY43 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
CHMP4AQ9BY43 RN7SKP160-201ENST00000363804 340 ntBASIC7.18□□□□□ -1.26
CHMP4AQ9BY43 RN7SKP28-201ENST00000364770 305 ntBASIC7.18□□□□□ -1.26
CHMP4AQ9BY43 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC7.18□□□□□ -1.26
CHMP4AQ9BY43 RNU6-146P-201ENST00000384602 108 ntBASIC7.18□□□□□ -1.26
CHMP4AQ9BY43 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
CHMP4AQ9BY43 U3.25-201ENST00000391209 220 ntBASIC7.18□□□□□ -1.26
CHMP4AQ9BY43 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC7.18□□□□□ -1.26
CHMP4AQ9BY43 RIMKLBP2-201ENST00000424737 654 ntBASIC7.18□□□□□ -1.26
CHMP4AQ9BY43 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC7.18□□□□□ -1.26
CHMP4AQ9BY43 HMGB1P26-201ENST00000452520 628 ntBASIC7.18□□□□□ -1.26
CHMP4AQ9BY43 RPL12P39-201ENST00000455456 496 ntBASIC7.18□□□□□ -1.26
CHMP4AQ9BY43 RN7SL51P-201ENST00000468230 285 ntBASIC7.18□□□□□ -1.26
CHMP4AQ9BY43 RPL5P22-201ENST00000480199 884 ntBASIC7.18□□□□□ -1.26
CHMP4AQ9BY43 AC108693.1-201ENST00000496068 432 ntBASIC7.18□□□□□ -1.26
CHMP4AQ9BY43 HMGB1P3-201ENST00000502802 616 ntBASIC7.18□□□□□ -1.26
CHMP4AQ9BY43 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC7.18□□□□□ -1.26
CHMP4AQ9BY43 RNU6-941P-201ENST00000516346 108 ntBASIC7.18□□□□□ -1.26
CHMP4AQ9BY43 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC7.18□□□□□ -1.26
CHMP4AQ9BY43 AC021483.2-201ENST00000567415 758 ntBASIC7.18□□□□□ -1.26
CHMP4AQ9BY43 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC7.18□□□□□ -1.26
CHMP4AQ9BY43 AC025574.2-201ENST00000615621 514 ntBASIC7.18□□□□□ -1.26
CHMP4AQ9BY43 AC139769.3-201ENST00000618383 175 ntBASIC7.18□□□□□ -1.26
CHMP4AQ9BY43 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
CHMP4AQ9BY43 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC7.18□□□□□ -1.26
CHMP4AQ9BY43 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
CHMP4AQ9BY43 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
CHMP4AQ9BY43 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC7.18□□□□□ -1.26
CHMP4AQ9BY43 AC022893.2-201ENST00000564832 3296 ntBASIC7.18□□□□□ -1.26
CHMP4AQ9BY43 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
CHMP4AQ9BY43 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC7.17□□□□□ -1.26
CHMP4AQ9BY43 AP002512.4-202ENST00000641599 4530 ntBASIC7.17□□□□□ -1.26
CHMP4AQ9BY43 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CHMP4AQ9BY43 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC7.17□□□□□ -1.26
CHMP4AQ9BY43 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CHMP4AQ9BY43 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
CHMP4AQ9BY43 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
CHMP4AQ9BY43 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CHMP4AQ9BY43 GAPDHP24-201ENST00000328713 983 ntBASIC7.17□□□□□ -1.26
CHMP4AQ9BY43 AL121886.1-201ENST00000358609 435 ntBASIC7.17□□□□□ -1.26
CHMP4AQ9BY43 SNORA27.3-201ENST00000364937 134 ntBASIC7.17□□□□□ -1.26
CHMP4AQ9BY43 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC7.17□□□□□ -1.26
CHMP4AQ9BY43 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC7.17□□□□□ -1.26
CHMP4AQ9BY43 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC7.17□□□□□ -1.26
CHMP4AQ9BY43 AP000547.1-201ENST00000454360 617 ntBASIC7.17□□□□□ -1.26
CHMP4AQ9BY43 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC7.17□□□□□ -1.26
CHMP4AQ9BY43 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC7.17□□□□□ -1.26
CHMP4AQ9BY43 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC7.17□□□□□ -1.26
CHMP4AQ9BY43 ATP5LP3-201ENST00000514223 304 ntBASIC7.17□□□□□ -1.26
CHMP4AQ9BY43 RNU6-1004P-201ENST00000516584 111 ntBASIC7.17□□□□□ -1.26
CHMP4AQ9BY43 IGLV3-24-201ENST00000517477 197 ntBASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms