Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 ARID1A-209ENST00000615191 3804 ntTSL 5 BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 SYT14-202ENST00000367019 2997 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 MAPK10-279ENST00000641157 2449 ntBASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 GAPVD1-204ENST00000394083 4747 ntTSL 5 BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 TACC2-226ENST00000513429 4114 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 RNU6-1331P-201ENST00000363658 106 ntBASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 RNU5E-5P-201ENST00000365379 116 ntBASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 SNORA70-201ENST00000384436 135 ntBASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 Y_RNA.579-201ENST00000390939 94 ntBASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 HMGB3P18-201ENST00000406327 590 ntBASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 RNU6-908P-201ENST00000410160 94 ntBASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 AL160290.1-201ENST00000415509 416 ntTSL 3 BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 DAZAP2-202ENST00000425012 1117 ntTSL 2 BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 SDAD1P3-201ENST00000427380 333 ntBASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 HMGN1P36-201ENST00000446623 298 ntBASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 AC091685.2-201ENST00000454924 864 ntBASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 SEPT14P4-201ENST00000513445 186 ntBASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 RNA5SP271-201ENST00000516700 88 ntBASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 IGHVIII-26-1-201ENST00000520387 250 ntBASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 AP003122.4-201ENST00000530980 758 ntBASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 OR4A1P-201ENST00000532342 920 ntBASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 AC092747.2-201ENST00000545069 983 ntBASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 OR6C73P-201ENST00000546432 358 ntBASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 CLMN-206ENST00000556441 452 ntTSL 5 BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 RPL12P25-202ENST00000598100 674 ntBASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 SUMO2P14-201ENST00000604488 293 ntBASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 GC-201ENST00000273951 1972 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 CSNK2A1-201ENST00000217244 4416 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 TNFSF15-201ENST00000374044 2789 ntBASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 AC016722.3-201ENST00000568862 2463 ntBASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 CSRNP3-203ENST00000409420 2545 ntTSL 5 BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 SLC5A1-201ENST00000266088 5061 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 ZNF343-201ENST00000278772 3632 ntAPPRIS P3 TSL 2 BASIC7.18□□□□□ -1.26
COL25A1Q9BXS0 JAKMIP2-202ENST00000333010 2992 ntTSL 2 BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 AC138393.1-206ENST00000540997 1886 ntBASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 UBE2N-205ENST00000550657 3018 ntTSL 2 BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 SLC11A2-203ENST00000394904 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 AC125603.4-201ENST00000621942 2699 ntBASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 AC135178.2-201ENST00000582471 3087 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 AC013268.3-201ENST00000262716 2324 ntBASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 PIWIL3-201ENST00000332271 3504 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 EGFLAM-AS4-201ENST00000512496 1579 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 CDH26-202ENST00000348616 3182 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 CHRDL1-203ENST00000394797 2413 ntAPPRIS P3 TSL 5 BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 UGT2B7-203ENST00000508661 1633 ntTSL 2 BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 LACTB2-AS1-201ENST00000499227 3716 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 AC005863.1-201ENST00000379640 2998 ntTSL 2 BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 RNU6-43P-201ENST00000384302 107 ntBASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 Y_RNA.476-201ENST00000384347 108 ntBASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 VN1R8P-201ENST00000407739 893 ntBASIC7.17□□□□□ -1.26
COL25A1Q9BXS0 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms