Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
USB1Q9BQ65 AL358394.3-202ENST00000599308 832 ntTSL 5 BASIC7.31□□□□□ -1.24
USB1Q9BQ65 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC7.31□□□□□ -1.24
USB1Q9BQ65 AL157899.1-201ENST00000604110 936 ntBASIC7.31□□□□□ -1.24
USB1Q9BQ65 AF287957.1-201ENST00000607368 1595 ntBASIC7.31□□□□□ -1.24
USB1Q9BQ65 AC130324.3-201ENST00000614165 542 ntBASIC7.31□□□□□ -1.24
USB1Q9BQ65 Metazoa_SRP.192-201ENST00000616260 286 ntBASIC7.31□□□□□ -1.24
USB1Q9BQ65 AC096861.1-201ENST00000616652 240 ntBASIC7.31□□□□□ -1.24
USB1Q9BQ65 MIR6737-201ENST00000617385 70 ntBASIC7.31□□□□□ -1.24
USB1Q9BQ65 GSTTP1-204ENST00000621179 920 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
USB1Q9BQ65 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.31□□□□□ -1.24
USB1Q9BQ65 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC7.31□□□□□ -1.24
USB1Q9BQ65 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
USB1Q9BQ65 CYCS-201ENST00000305786 4098 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
USB1Q9BQ65 SCYL2-211ENST00000635101 3948 ntTSL 5 BASIC7.31□□□□□ -1.24
USB1Q9BQ65 DCX-201ENST00000356220 3019 ntAPPRIS ALT1 TSL 5 BASIC7.31□□□□□ -1.24
USB1Q9BQ65 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC7.31□□□□□ -1.24
USB1Q9BQ65 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.31□□□□□ -1.24
USB1Q9BQ65 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
USB1Q9BQ65 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
USB1Q9BQ65 TP63-204ENST00000392460 1668 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
USB1Q9BQ65 WDR95P-201ENST00000425638 1542 ntBASIC7.31□□□□□ -1.24
USB1Q9BQ65 ATP2B1-204ENST00000428670 7032 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
USB1Q9BQ65 HDAC1P2-201ENST00000453661 1398 ntBASIC7.31□□□□□ -1.24
USB1Q9BQ65 NAA40-202ENST00000377793 3664 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
USB1Q9BQ65 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC7.31□□□□□ -1.24
USB1Q9BQ65 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC7.31□□□□□ -1.24
USB1Q9BQ65 CDC42SE2-208ENST00000505065 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
USB1Q9BQ65 BDNF-206ENST00000395983 3776 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
USB1Q9BQ65 BEND2-202ENST00000380033 4611 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
USB1Q9BQ65 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC7.31□□□□□ -1.24
USB1Q9BQ65 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
USB1Q9BQ65 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
USB1Q9BQ65 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC7.3□□□□□ -1.24
USB1Q9BQ65 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
USB1Q9BQ65 CTNNA1-210ENST00000518825 3536 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
USB1Q9BQ65 COPS4-201ENST00000264389 1744 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
USB1Q9BQ65 AL049634.1-201ENST00000453770 1720 ntBASIC7.3□□□□□ -1.24
USB1Q9BQ65 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.3□□□□□ -1.24
USB1Q9BQ65 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
USB1Q9BQ65 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC7.3□□□□□ -1.24
USB1Q9BQ65 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
USB1Q9BQ65 HDAC1P1-201ENST00000455482 1445 ntBASIC7.3□□□□□ -1.24
USB1Q9BQ65 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
USB1Q9BQ65 DUXAP8-204ENST00000447898 4136 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
USB1Q9BQ65 Y_RNA.135-201ENST00000363439 95 ntBASIC7.3□□□□□ -1.24
USB1Q9BQ65 RNU6-606P-201ENST00000384721 111 ntBASIC7.3□□□□□ -1.24
USB1Q9BQ65 MIR595-201ENST00000384905 96 ntBASIC7.3□□□□□ -1.24
USB1Q9BQ65 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
USB1Q9BQ65 AL590762.1-201ENST00000391782 432 ntBASIC7.3□□□□□ -1.24
USB1Q9BQ65 OR4E2-201ENST00000408935 942 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
USB1Q9BQ65 RNU6-193P-201ENST00000410977 107 ntBASIC7.3□□□□□ -1.24
USB1Q9BQ65 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC7.3□□□□□ -1.24
USB1Q9BQ65 RPS10P21-201ENST00000430654 475 ntBASIC7.3□□□□□ -1.24
USB1Q9BQ65 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC7.3□□□□□ -1.24
USB1Q9BQ65 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC7.3□□□□□ -1.24
USB1Q9BQ65 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC7.3□□□□□ -1.24
USB1Q9BQ65 RPL12P4-201ENST00000432629 497 ntBASIC7.3□□□□□ -1.24
USB1Q9BQ65 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.3□□□□□ -1.24
USB1Q9BQ65 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC7.3□□□□□ -1.24
USB1Q9BQ65 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC7.3□□□□□ -1.24
USB1Q9BQ65 AC073909.1-201ENST00000447112 999 ntBASIC7.3□□□□□ -1.24
USB1Q9BQ65 RPS23P9-201ENST00000448848 438 ntBASIC7.3□□□□□ -1.24
USB1Q9BQ65 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC7.3□□□□□ -1.24
USB1Q9BQ65 MRPS31P2-201ENST00000451581 518 ntBASIC7.3□□□□□ -1.24
USB1Q9BQ65 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC7.3□□□□□ -1.24
USB1Q9BQ65 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC7.3□□□□□ -1.24
USB1Q9BQ65 RN7SL854P-201ENST00000459767 295 ntBASIC7.3□□□□□ -1.24
USB1Q9BQ65 RPL12P32-201ENST00000484010 494 ntBASIC7.3□□□□□ -1.24
USB1Q9BQ65 AL031864.2-201ENST00000498507 350 ntBASIC7.3□□□□□ -1.24
USB1Q9BQ65 AC091965.3-201ENST00000506236 208 ntBASIC7.3□□□□□ -1.24
USB1Q9BQ65 AC079795.1-201ENST00000508847 358 ntTSL 3 BASIC7.3□□□□□ -1.24
USB1Q9BQ65 GUSBP3-201ENST00000509348 423 ntBASIC7.3□□□□□ -1.24
USB1Q9BQ65 AC098591.2-201ENST00000510152 315 ntBASIC7.3□□□□□ -1.24
USB1Q9BQ65 AC095059.2-201ENST00000510601 933 ntBASIC7.3□□□□□ -1.24
USB1Q9BQ65 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC7.3□□□□□ -1.24
USB1Q9BQ65 PSMA6-202ENST00000540871 912 ntTSL 2 BASIC7.3□□□□□ -1.24
USB1Q9BQ65 EIF4A1P4-201ENST00000550578 1213 ntBASIC7.3□□□□□ -1.24
USB1Q9BQ65 AC048383.1-201ENST00000558226 527 ntTSL 4 BASIC7.3□□□□□ -1.24
USB1Q9BQ65 AC025198.1-201ENST00000578331 419 ntBASIC7.3□□□□□ -1.24
USB1Q9BQ65 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC7.3□□□□□ -1.24
USB1Q9BQ65 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC7.3□□□□□ -1.24
USB1Q9BQ65 CD209-208ENST00000593821 807 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
USB1Q9BQ65 ZNF83-210ENST00000597161 509 ntTSL 4 BASIC7.3□□□□□ -1.24
USB1Q9BQ65 MIR6751-201ENST00000610479 63 ntBASIC7.3□□□□□ -1.24
USB1Q9BQ65 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
USB1Q9BQ65 ABCB4-203ENST00000359206 3923 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
USB1Q9BQ65 LINC02111-201ENST00000505158 2312 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
USB1Q9BQ65 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
USB1Q9BQ65 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
USB1Q9BQ65 IL31RA-206ENST00000447346 2577 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
USB1Q9BQ65 RNF6P1-201ENST00000444889 1784 ntBASIC7.3□□□□□ -1.24
USB1Q9BQ65 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC7.3□□□□□ -1.24
USB1Q9BQ65 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
USB1Q9BQ65 ELF4-202ENST00000335997 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
USB1Q9BQ65 CDC42-201ENST00000315554 1452 ntAPPRIS P5 TSL 1 (best) BASIC7.3□□□□□ -1.24
USB1Q9BQ65 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC7.3□□□□□ -1.24
USB1Q9BQ65 DCLRE1C-206ENST00000378254 2485 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
USB1Q9BQ65 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC7.29□□□□□ -1.24
USB1Q9BQ65 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms