Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC009878.1-201ENST00000621819 340 ntBASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
SYNGAP1Q96PV0 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 MTCO1P28-201ENST00000574177 1528 ntBASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 AL354854.1-201ENST00000455940 1363 ntBASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 OR2M1P-201ENST00000318104 951 ntBASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 RNA5SP333-201ENST00000363466 118 ntBASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 RNA5SP334-201ENST00000364825 118 ntBASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 RNU6-157P-201ENST00000383957 107 ntBASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 MT-TH-201ENST00000387441 69 ntBASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 RSL24D1P4-201ENST00000400938 484 ntBASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 RPS7P9-201ENST00000414704 586 ntBASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 ATP6V1E1P1-201ENST00000439215 681 ntBASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 MTCYBP42-201ENST00000444653 1130 ntBASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 PPIAP7-201ENST00000454070 489 ntBASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 AL133351.3-201ENST00000454998 193 ntBASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 VPS25P1-201ENST00000455691 508 ntBASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 RPL7L1P4-201ENST00000513004 707 ntBASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 AC060775.1-201ENST00000518241 520 ntBASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 AP000620.1-201ENST00000527147 504 ntBASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 DEFB130C-202ENST00000530001 230 ntBASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 AC007225.2-201ENST00000562529 256 ntBASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 AC027104.1-201ENST00000563702 681 ntBASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 NPIPB1P-202ENST00000588786 828 ntBASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 VN1R83P-201ENST00000595685 445 ntBASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 AL953862.2-201ENST00000603089 820 ntBASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 AL683813.2-201ENST00000605245 502 ntBASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 AL109618.2-201ENST00000605527 211 ntBASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 AC012557.1-201ENST00000607115 611 ntBASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 AC017083.3-201ENST00000609955 700 ntBASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 AL356266.1-201ENST00000623311 483 ntBASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 AC129778.1-202ENST00000623812 261 ntBASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 AL591379.1-207ENST00000635982 261 ntBASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 AMYH02020865.1-205ENST00000636189 261 ntBASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 AC087359.1-201ENST00000508335 1740 ntBASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
SYNGAP1Q96PV0 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 AC009120.2-204ENST00000621548 2032 ntBASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SYNGAP1Q96PV0 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms