Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VPS33AQ96AX1 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VPS33AQ96AX1 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VPS33AQ96AX1 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.27□□□□□ -1.57
VPS33AQ96AX1 RNA5SP477-201ENST00000362639 119 ntBASIC5.27□□□□□ -1.57
VPS33AQ96AX1 RNU6-666P-201ENST00000363499 107 ntBASIC5.27□□□□□ -1.57
VPS33AQ96AX1 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.27□□□□□ -1.57
VPS33AQ96AX1 AC007161.1-204ENST00000423039 460 ntBASIC5.27□□□□□ -1.57
VPS33AQ96AX1 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.27□□□□□ -1.57
VPS33AQ96AX1 AC006335.2-201ENST00000437993 330 ntBASIC5.27□□□□□ -1.57
VPS33AQ96AX1 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.27□□□□□ -1.57
VPS33AQ96AX1 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.27□□□□□ -1.57
VPS33AQ96AX1 MTND2P25-201ENST00000449028 610 ntBASIC5.27□□□□□ -1.57
VPS33AQ96AX1 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.27□□□□□ -1.57
VPS33AQ96AX1 AC068228.1-201ENST00000461723 211 ntBASIC5.27□□□□□ -1.57
VPS33AQ96AX1 CABYRP1-201ENST00000465493 1045 ntBASIC5.27□□□□□ -1.57
VPS33AQ96AX1 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.27□□□□□ -1.57
VPS33AQ96AX1 RPL5P22-201ENST00000480199 884 ntBASIC5.27□□□□□ -1.57
VPS33AQ96AX1 IGBP1P4-201ENST00000503202 879 ntBASIC5.27□□□□□ -1.57
VPS33AQ96AX1 OR5H7P-201ENST00000514084 930 ntBASIC5.27□□□□□ -1.57
VPS33AQ96AX1 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.27□□□□□ -1.57
VPS33AQ96AX1 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.27□□□□□ -1.57
VPS33AQ96AX1 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.27□□□□□ -1.57
VPS33AQ96AX1 NOP56P3-201ENST00000549457 385 ntBASIC5.27□□□□□ -1.57
VPS33AQ96AX1 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.27□□□□□ -1.57
VPS33AQ96AX1 AL049870.4-201ENST00000555741 486 ntBASIC5.27□□□□□ -1.57
VPS33AQ96AX1 AC027176.2-201ENST00000559166 746 ntBASIC5.27□□□□□ -1.57
VPS33AQ96AX1 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
VPS33AQ96AX1 MIR3154-201ENST00000577829 84 ntBASIC5.27□□□□□ -1.57
VPS33AQ96AX1 H3F3BP2-201ENST00000583907 357 ntBASIC5.27□□□□□ -1.57
VPS33AQ96AX1 AL049844.2-201ENST00000604280 628 ntBASIC5.27□□□□□ -1.57
VPS33AQ96AX1 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.27□□□□□ -1.57
VPS33AQ96AX1 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.27□□□□□ -1.57
VPS33AQ96AX1 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.27□□□□□ -1.57
VPS33AQ96AX1 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.27□□□□□ -1.57
VPS33AQ96AX1 FRG1EP-201ENST00000634469 770 ntBASIC5.27□□□□□ -1.57
VPS33AQ96AX1 AL163152.1-201ENST00000642001 374 ntBASIC5.27□□□□□ -1.57
VPS33AQ96AX1 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.27□□□□□ -1.57
VPS33AQ96AX1 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
VPS33AQ96AX1 MRE11P1-201ENST00000464884 2127 ntBASIC5.27□□□□□ -1.57
VPS33AQ96AX1 AC104623.2-202ENST00000623477 4002 ntBASIC5.27□□□□□ -1.57
VPS33AQ96AX1 AC090181.3-201ENST00000624777 1514 ntBASIC5.27□□□□□ -1.57
VPS33AQ96AX1 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VPS33AQ96AX1 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
VPS33AQ96AX1 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS33AQ96AX1 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
VPS33AQ96AX1 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
VPS33AQ96AX1 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
VPS33AQ96AX1 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS33AQ96AX1 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.26□□□□□ -1.57
VPS33AQ96AX1 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
VPS33AQ96AX1 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
VPS33AQ96AX1 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS33AQ96AX1 SNORA64.1-201ENST00000362600 132 ntBASIC5.26□□□□□ -1.57
VPS33AQ96AX1 AK4P4-201ENST00000419465 646 ntBASIC5.26□□□□□ -1.57
VPS33AQ96AX1 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.26□□□□□ -1.57
VPS33AQ96AX1 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.26□□□□□ -1.57
VPS33AQ96AX1 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VPS33AQ96AX1 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.26□□□□□ -1.57
VPS33AQ96AX1 TIMM8BP2-201ENST00000445940 251 ntBASIC5.26□□□□□ -1.57
VPS33AQ96AX1 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.26□□□□□ -1.57
VPS33AQ96AX1 EEF1B2P3-201ENST00000447718 678 ntBASIC5.26□□□□□ -1.57
VPS33AQ96AX1 OR52E3P-201ENST00000452083 936 ntBASIC5.26□□□□□ -1.57
VPS33AQ96AX1 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VPS33AQ96AX1 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.26□□□□□ -1.57
VPS33AQ96AX1 HIGD1AP18-201ENST00000520730 278 ntBASIC5.26□□□□□ -1.57
VPS33AQ96AX1 OR8A2P-201ENST00000528631 952 ntBASIC5.26□□□□□ -1.57
VPS33AQ96AX1 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.26□□□□□ -1.57
VPS33AQ96AX1 AC084121.1-201ENST00000533882 835 ntBASIC5.26□□□□□ -1.57
VPS33AQ96AX1 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.26□□□□□ -1.57
VPS33AQ96AX1 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS33AQ96AX1 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.26□□□□□ -1.57
VPS33AQ96AX1 CKS1BP1-201ENST00000555221 240 ntBASIC5.26□□□□□ -1.57
VPS33AQ96AX1 AL845552.1-201ENST00000556820 323 ntBASIC5.26□□□□□ -1.57
VPS33AQ96AX1 LINC00557-201ENST00000563184 1279 ntBASIC5.26□□□□□ -1.57
VPS33AQ96AX1 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.26□□□□□ -1.57
VPS33AQ96AX1 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.26□□□□□ -1.57
VPS33AQ96AX1 SS18L2P2-201ENST00000583960 235 ntBASIC5.26□□□□□ -1.57
VPS33AQ96AX1 AC005242.1-201ENST00000585658 438 ntBASIC5.26□□□□□ -1.57
VPS33AQ96AX1 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS33AQ96AX1 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.26□□□□□ -1.57
VPS33AQ96AX1 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS33AQ96AX1 AL122125.1-201ENST00000616999 600 ntBASIC5.26□□□□□ -1.57
VPS33AQ96AX1 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
VPS33AQ96AX1 AC011755.1-201ENST00000623763 2049 ntBASIC5.26□□□□□ -1.57
VPS33AQ96AX1 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS33AQ96AX1 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
VPS33AQ96AX1 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.26□□□□□ -1.57
VPS33AQ96AX1 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VPS33AQ96AX1 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VPS33AQ96AX1 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VPS33AQ96AX1 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS33AQ96AX1 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VPS33AQ96AX1 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS33AQ96AX1 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
VPS33AQ96AX1 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
VPS33AQ96AX1 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS33AQ96AX1 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS33AQ96AX1 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS33AQ96AX1 THAP12P5-201ENST00000405864 2275 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms