Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC130365.2-201ENST00000525882 1201 ntBASIC6.58□□□□□ -1.36
ERCC4Q92889 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC6.58□□□□□ -1.36
ERCC4Q92889 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC6.58□□□□□ -1.36
ERCC4Q92889 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC6.58□□□□□ -1.36
ERCC4Q92889 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.58□□□□□ -1.36
ERCC4Q92889 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.58□□□□□ -1.36
ERCC4Q92889 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC6.58□□□□□ -1.36
ERCC4Q92889 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
ERCC4Q92889 AL078601.3-201ENST00000573303 535 ntBASIC6.58□□□□□ -1.36
ERCC4Q92889 OR1E3-201ENST00000575608 948 ntBASIC6.58□□□□□ -1.36
ERCC4Q92889 AP005119.1-201ENST00000580956 292 ntBASIC6.58□□□□□ -1.36
ERCC4Q92889 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC6.58□□□□□ -1.36
ERCC4Q92889 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ERCC4Q92889 AL513327.3-201ENST00000602618 469 ntBASIC6.58□□□□□ -1.36
ERCC4Q92889 MIR7109-201ENST00000613748 65 ntBASIC6.58□□□□□ -1.36
ERCC4Q92889 AL591926.1-201ENST00000620542 217 ntBASIC6.58□□□□□ -1.36
ERCC4Q92889 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.58□□□□□ -1.36
ERCC4Q92889 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
ERCC4Q92889 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ERCC4Q92889 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.58□□□□□ -1.36
ERCC4Q92889 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.58□□□□□ -1.36
ERCC4Q92889 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.58□□□□□ -1.36
ERCC4Q92889 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ERCC4Q92889 AC132825.1-201ENST00000463573 2247 ntBASIC6.58□□□□□ -1.36
ERCC4Q92889 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ERCC4Q92889 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ERCC4Q92889 AL031595.2-201ENST00000624215 19071 ntBASIC6.58□□□□□ -1.36
ERCC4Q92889 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC6.57□□□□□ -1.36
ERCC4Q92889 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.57□□□□□ -1.36
ERCC4Q92889 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
ERCC4Q92889 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ERCC4Q92889 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
ERCC4Q92889 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.57□□□□□ -1.36
ERCC4Q92889 AC005005.4-201ENST00000623789 16698 ntBASIC6.57□□□□□ -1.36
ERCC4Q92889 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
ERCC4Q92889 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ERCC4Q92889 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ERCC4Q92889 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
ERCC4Q92889 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
ERCC4Q92889 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.57□□□□□ -1.36
ERCC4Q92889 SNORD116-8-201ENST00000384365 95 ntBASIC6.57□□□□□ -1.36
ERCC4Q92889 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
ERCC4Q92889 SNORD65-201ENST00000391079 73 ntBASIC6.57□□□□□ -1.36
ERCC4Q92889 CASP3-203ENST00000393588 677 ntTSL 4 BASIC6.57□□□□□ -1.36
ERCC4Q92889 LRRC37BP1-201ENST00000398851 714 ntBASIC6.57□□□□□ -1.36
ERCC4Q92889 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.57□□□□□ -1.36
ERCC4Q92889 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.57□□□□□ -1.36
ERCC4Q92889 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC6.57□□□□□ -1.36
ERCC4Q92889 METTL15P3-201ENST00000415522 1221 ntBASIC6.57□□□□□ -1.36
ERCC4Q92889 MTCO3P4-201ENST00000419236 787 ntBASIC6.57□□□□□ -1.36
ERCC4Q92889 GNG5P5-201ENST00000420444 220 ntBASIC6.57□□□□□ -1.36
ERCC4Q92889 AC010099.3-201ENST00000423896 409 ntBASIC6.57□□□□□ -1.36
ERCC4Q92889 AC099782.1-201ENST00000425889 474 ntBASIC6.57□□□□□ -1.36
ERCC4Q92889 DEFB130D-201ENST00000426866 237 ntBASIC6.57□□□□□ -1.36
ERCC4Q92889 CRIP1P1-201ENST00000427567 185 ntBASIC6.57□□□□□ -1.36
ERCC4Q92889 RPSAP65-201ENST00000429660 595 ntBASIC6.57□□□□□ -1.36
ERCC4Q92889 GAPDHP48-201ENST00000436626 961 ntBASIC6.57□□□□□ -1.36
ERCC4Q92889 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.57□□□□□ -1.36
ERCC4Q92889 AL445466.1-201ENST00000448432 357 ntBASIC6.57□□□□□ -1.36
ERCC4Q92889 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.57□□□□□ -1.36
ERCC4Q92889 RN7SL72P-201ENST00000460697 269 ntBASIC6.57□□□□□ -1.36
ERCC4Q92889 CREM-220ENST00000463314 964 ntTSL 2 BASIC6.57□□□□□ -1.36
ERCC4Q92889 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC6.57□□□□□ -1.36
ERCC4Q92889 AC079080.1-201ENST00000479841 822 ntBASIC6.57□□□□□ -1.36
ERCC4Q92889 SYT14P1-201ENST00000481459 721 ntBASIC6.57□□□□□ -1.36
ERCC4Q92889 AP002453.1-201ENST00000492327 668 ntBASIC6.57□□□□□ -1.36
ERCC4Q92889 RN7SL362P-201ENST00000494228 267 ntBASIC6.57□□□□□ -1.36
ERCC4Q92889 AC122718.2-201ENST00000505325 591 ntBASIC6.57□□□□□ -1.36
ERCC4Q92889 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.57□□□□□ -1.36
ERCC4Q92889 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.57□□□□□ -1.36
ERCC4Q92889 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.57□□□□□ -1.36
ERCC4Q92889 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.57□□□□□ -1.36
ERCC4Q92889 HAUS1P3-201ENST00000523909 662 ntBASIC6.57□□□□□ -1.36
ERCC4Q92889 OR7E128P-201ENST00000532736 1024 ntBASIC6.57□□□□□ -1.36
ERCC4Q92889 MIR3154-201ENST00000577829 84 ntBASIC6.57□□□□□ -1.36
ERCC4Q92889 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.57□□□□□ -1.36
ERCC4Q92889 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.57□□□□□ -1.36
ERCC4Q92889 ZNF92P3-201ENST00000596594 954 ntBASIC6.57□□□□□ -1.36
ERCC4Q92889 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.57□□□□□ -1.36
ERCC4Q92889 AL451086.1-201ENST00000605596 223 ntBASIC6.57□□□□□ -1.36
ERCC4Q92889 AC012557.2-201ENST00000605919 418 ntBASIC6.57□□□□□ -1.36
ERCC4Q92889 AC107952.2-201ENST00000606048 486 ntBASIC6.57□□□□□ -1.36
ERCC4Q92889 MIR6806-201ENST00000622141 64 ntBASIC6.57□□□□□ -1.36
ERCC4Q92889 AC004943.3-201ENST00000624116 600 ntBASIC6.57□□□□□ -1.36
ERCC4Q92889 FRG1EP-201ENST00000634469 770 ntBASIC6.57□□□□□ -1.36
ERCC4Q92889 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC6.57□□□□□ -1.36
ERCC4Q92889 AC073869.7-201ENST00000640874 297 ntBASIC6.57□□□□□ -1.36
ERCC4Q92889 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ERCC4Q92889 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ERCC4Q92889 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
ERCC4Q92889 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
ERCC4Q92889 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ERCC4Q92889 AC099786.3-201ENST00000565735 1410 ntBASIC6.57□□□□□ -1.36
ERCC4Q92889 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
ERCC4Q92889 AC004158.1-201ENST00000564508 4319 ntBASIC6.57□□□□□ -1.36
ERCC4Q92889 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.56□□□□□ -1.36
ERCC4Q92889 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
ERCC4Q92889 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
ERCC4Q92889 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
ERCC4Q92889 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms