Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 AP002799.1-201ENST00000623552 423 ntBASIC4.44□□□□□ -1.7
CLDND2Q8NHS1 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
CLDND2Q8NHS1 LINC01739-205ENST00000641890 573 ntBASIC4.44□□□□□ -1.7
CLDND2Q8NHS1 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CLDND2Q8NHS1 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CLDND2Q8NHS1 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLDND2Q8NHS1 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLDND2Q8NHS1 HSPA8P18-201ENST00000439846 1928 ntBASIC4.44□□□□□ -1.7
CLDND2Q8NHS1 AL449283.1-201ENST00000602631 3403 ntBASIC4.44□□□□□ -1.7
CLDND2Q8NHS1 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CLDND2Q8NHS1 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CLDND2Q8NHS1 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLDND2Q8NHS1 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CLDND2Q8NHS1 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.44□□□□□ -1.7
CLDND2Q8NHS1 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
CLDND2Q8NHS1 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
CLDND2Q8NHS1 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 OR1L6-202ENST00000373684 1044 ntBASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 DBIP1-201ENST00000401435 260 ntBASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 HSPE1P16-201ENST00000426640 348 ntBASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 AC016772.1-201ENST00000444170 1261 ntBASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 RPL7P61-201ENST00000451721 751 ntBASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 RN7SL423P-201ENST00000486202 304 ntBASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 RPS23P1-201ENST00000491662 432 ntBASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 AC091912.1-201ENST00000511351 248 ntBASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 EIF3KP3-201ENST00000514461 639 ntBASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 AC027369.5-201ENST00000533838 755 ntBASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 AC009237.13-201ENST00000603193 276 ntBASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 AC005252.1-201ENST00000604518 1063 ntBASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 AP001642.1-201ENST00000624727 2117 ntBASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 Z95331.1-201ENST00000623075 23112 ntBASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLDND2Q8NHS1 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CLDND2Q8NHS1 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLDND2Q8NHS1 AL731566.1-201ENST00000620490 1937 ntBASIC4.42□□□□□ -1.7
CLDND2Q8NHS1 AC008079.2-201ENST00000623543 20396 ntBASIC4.42□□□□□ -1.7
CLDND2Q8NHS1 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLDND2Q8NHS1 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.42□□□□□ -1.7
CLDND2Q8NHS1 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.42□□□□□ -1.7
CLDND2Q8NHS1 SMG1P4-204ENST00000523028 4131 ntBASIC4.42□□□□□ -1.7
CLDND2Q8NHS1 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CLDND2Q8NHS1 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLDND2Q8NHS1 MIR550A3-201ENST00000390735 95 ntBASIC4.42□□□□□ -1.7
CLDND2Q8NHS1 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLDND2Q8NHS1 AL133270.1-201ENST00000402635 279 ntBASIC4.42□□□□□ -1.7
CLDND2Q8NHS1 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CLDND2Q8NHS1 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDND2Q8NHS1 AL590762.4-201ENST00000425885 253 ntBASIC4.42□□□□□ -1.7
CLDND2Q8NHS1 RPL34P6-201ENST00000432390 345 ntBASIC4.42□□□□□ -1.7
CLDND2Q8NHS1 VN1R54P-201ENST00000435210 1049 ntBASIC4.42□□□□□ -1.7
CLDND2Q8NHS1 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDND2Q8NHS1 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.42□□□□□ -1.7
CLDND2Q8NHS1 AP000797.2-201ENST00000475768 606 ntBASIC4.42□□□□□ -1.7
CLDND2Q8NHS1 AC090114.3-201ENST00000479267 829 ntBASIC4.42□□□□□ -1.7
CLDND2Q8NHS1 AC058823.1-201ENST00000485315 474 ntBASIC4.42□□□□□ -1.7
CLDND2Q8NHS1 MTND5P12-201ENST00000502851 1449 ntBASIC4.42□□□□□ -1.7
CLDND2Q8NHS1 NDUFB5P1-201ENST00000508134 564 ntBASIC4.42□□□□□ -1.7
CLDND2Q8NHS1 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLDND2Q8NHS1 AC021106.1-201ENST00000509020 1058 ntBASIC4.42□□□□□ -1.7
CLDND2Q8NHS1 GTF2F2P1-201ENST00000511083 675 ntBASIC4.42□□□□□ -1.7
CLDND2Q8NHS1 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.42□□□□□ -1.7
CLDND2Q8NHS1 AC013701.1-201ENST00000522657 465 ntBASIC4.42□□□□□ -1.7
CLDND2Q8NHS1 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.42□□□□□ -1.7
CLDND2Q8NHS1 AP000676.2-201ENST00000529711 301 ntBASIC4.42□□□□□ -1.7
CLDND2Q8NHS1 OR8G3P-201ENST00000533406 921 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 147.1 ms