Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC6.32□□□□□ -1.4
RTL9Q8NET4 AC073869.10-201ENST00000642016 354 ntBASIC6.32□□□□□ -1.4
RTL9Q8NET4 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RTL9Q8NET4 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RTL9Q8NET4 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RTL9Q8NET4 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RTL9Q8NET4 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RTL9Q8NET4 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RTL9Q8NET4 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC6.32□□□□□ -1.4
RTL9Q8NET4 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RTL9Q8NET4 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RTL9Q8NET4 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.32□□□□□ -1.4
RTL9Q8NET4 ABCC13-202ENST00000463099 3842 ntBASIC6.32□□□□□ -1.4
RTL9Q8NET4 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RTL9Q8NET4 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
RTL9Q8NET4 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.32□□□□□ -1.4
RTL9Q8NET4 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RTL9Q8NET4 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
RTL9Q8NET4 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RTL9Q8NET4 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC6.31□□□□□ -1.4
RTL9Q8NET4 SNORA66-201ENST00000384792 133 ntBASIC6.31□□□□□ -1.4
RTL9Q8NET4 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
RTL9Q8NET4 GAPDHP15-201ENST00000398586 975 ntBASIC6.31□□□□□ -1.4
RTL9Q8NET4 SNORA11-201ENST00000408789 128 ntBASIC6.31□□□□□ -1.4
RTL9Q8NET4 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC6.31□□□□□ -1.4
RTL9Q8NET4 AC009238.2-201ENST00000431026 355 ntBASIC6.31□□□□□ -1.4
RTL9Q8NET4 RPL19P16-201ENST00000433839 588 ntBASIC6.31□□□□□ -1.4
RTL9Q8NET4 MTND2P40-201ENST00000436718 841 ntBASIC6.31□□□□□ -1.4
RTL9Q8NET4 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC6.31□□□□□ -1.4
RTL9Q8NET4 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC6.31□□□□□ -1.4
RTL9Q8NET4 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.31□□□□□ -1.4
RTL9Q8NET4 RAB9BP1-201ENST00000519581 626 ntBASIC6.31□□□□□ -1.4
RTL9Q8NET4 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RTL9Q8NET4 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC6.31□□□□□ -1.4
RTL9Q8NET4 BGLT3-201ENST00000564523 994 ntBASIC6.31□□□□□ -1.4
RTL9Q8NET4 AL162574.1-201ENST00000615702 950 ntBASIC6.31□□□□□ -1.4
RTL9Q8NET4 AP001153.1-201ENST00000641024 338 ntBASIC6.31□□□□□ -1.4
RTL9Q8NET4 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.31□□□□□ -1.4
RTL9Q8NET4 NLRP3P1-201ENST00000622303 1785 ntBASIC6.31□□□□□ -1.4
RTL9Q8NET4 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.31□□□□□ -1.4
RTL9Q8NET4 AL137058.3-201ENST00000624531 3099 ntBASIC6.31□□□□□ -1.4
RTL9Q8NET4 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RTL9Q8NET4 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RTL9Q8NET4 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.31□□□□□ -1.4
RTL9Q8NET4 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
RTL9Q8NET4 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RTL9Q8NET4 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RTL9Q8NET4 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.31□□□□□ -1.4
RTL9Q8NET4 NCOA4P2-201ENST00000340589 1813 ntBASIC6.31□□□□□ -1.4
RTL9Q8NET4 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.31□□□□□ -1.4
RTL9Q8NET4 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RTL9Q8NET4 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.31□□□□□ -1.4
RTL9Q8NET4 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.31□□□□□ -1.4
RTL9Q8NET4 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RTL9Q8NET4 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.31□□□□□ -1.4
RTL9Q8NET4 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RTL9Q8NET4 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
RTL9Q8NET4 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RTL9Q8NET4 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RTL9Q8NET4 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RTL9Q8NET4 SNORA77-201ENST00000408716 125 ntBASIC6.31□□□□□ -1.4
RTL9Q8NET4 NPM1P18-201ENST00000434232 732 ntBASIC6.31□□□□□ -1.4
RTL9Q8NET4 AC093414.1-201ENST00000434712 514 ntBASIC6.31□□□□□ -1.4
RTL9Q8NET4 RPS29P9-201ENST00000440360 171 ntBASIC6.31□□□□□ -1.4
RTL9Q8NET4 RPL36AP15-201ENST00000444514 266 ntBASIC6.31□□□□□ -1.4
RTL9Q8NET4 GAPDHP14-201ENST00000450472 937 ntBASIC6.31□□□□□ -1.4
RTL9Q8NET4 IGHV5-78-201ENST00000450948 295 ntBASIC6.31□□□□□ -1.4
RTL9Q8NET4 AL513533.1-201ENST00000453728 415 ntBASIC6.31□□□□□ -1.4
RTL9Q8NET4 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
RTL9Q8NET4 AC093267.1-201ENST00000489176 961 ntBASIC6.31□□□□□ -1.4
RTL9Q8NET4 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.31□□□□□ -1.4
RTL9Q8NET4 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC6.31□□□□□ -1.4
RTL9Q8NET4 OR5AN2P-201ENST00000534535 896 ntBASIC6.31□□□□□ -1.4
RTL9Q8NET4 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
RTL9Q8NET4 MIR4270-201ENST00000581799 70 ntBASIC6.31□□□□□ -1.4
RTL9Q8NET4 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC6.31□□□□□ -1.4
RTL9Q8NET4 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.31□□□□□ -1.4
RTL9Q8NET4 AC009120.7-201ENST00000623452 780 ntBASIC6.31□□□□□ -1.4
RTL9Q8NET4 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC6.31□□□□□ -1.4
RTL9Q8NET4 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RTL9Q8NET4 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RTL9Q8NET4 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.3□□□□□ -1.4
RTL9Q8NET4 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RTL9Q8NET4 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RTL9Q8NET4 AC026951.1-201ENST00000559530 2459 ntBASIC6.3□□□□□ -1.4
RTL9Q8NET4 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.3□□□□□ -1.4
RTL9Q8NET4 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
RTL9Q8NET4 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.3□□□□□ -1.4
RTL9Q8NET4 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.3□□□□□ -1.4
RTL9Q8NET4 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
RTL9Q8NET4 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.3□□□□□ -1.4
RTL9Q8NET4 Z97832.1-201ENST00000402490 328 ntBASIC6.3□□□□□ -1.4
RTL9Q8NET4 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.3□□□□□ -1.4
RTL9Q8NET4 AC007559.1-201ENST00000428736 355 ntBASIC6.3□□□□□ -1.4
RTL9Q8NET4 KATNBL1P2-201ENST00000433311 835 ntBASIC6.3□□□□□ -1.4
RTL9Q8NET4 ZDHHC20P1-204ENST00000435787 423 ntBASIC6.3□□□□□ -1.4
RTL9Q8NET4 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC6.3□□□□□ -1.4
RTL9Q8NET4 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC6.3□□□□□ -1.4
RTL9Q8NET4 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.3□□□□□ -1.4
RTL9Q8NET4 BX842559.2-201ENST00000451418 605 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms