Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 DYNLL1P7-201ENST00000429273 258 ntBASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 KRTAP3-4P-201ENST00000430780 280 ntBASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 PSMD10P2-201ENST00000432890 672 ntBASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 AC023347.2-201ENST00000433994 462 ntBASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 MRPL22-202ENST00000439747 784 ntTSL 2 BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 AC007677.1-201ENST00000445757 515 ntBASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 OR52E7P-201ENST00000452394 933 ntBASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 HIGD1AP8-201ENST00000453927 274 ntBASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 GH2-204ENST00000456543 794 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 BTF3P5-201ENST00000457252 467 ntBASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 HMGN1P10-201ENST00000474557 553 ntBASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 NDUFS5P2-201ENST00000484004 306 ntBASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 UBA52P3-201ENST00000491303 382 ntBASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 AL031073.1-201ENST00000503029 1139 ntBASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 AC117522.3-201ENST00000507974 584 ntBASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 Y_RNA.672-201ENST00000516289 104 ntBASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 SCARNA20.3-201ENST00000516913 131 ntBASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 AP000790.1-201ENST00000528891 737 ntBASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 LINC01397-201ENST00000554808 579 ntTSL 4 BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 AC034105.2-201ENST00000561866 238 ntBASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 FLJ21408-204ENST00000566854 601 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 RPS3AP23-202ENST00000574601 686 ntBASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 H3F3BP2-201ENST00000583907 357 ntBASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 APOC2-202ENST00000585786 880 ntTSL 2 BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 APOC2-204ENST00000591597 447 ntTSL 5 BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 RN7SL113P-201ENST00000619959 299 ntBASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 AC006504.8-201ENST00000621046 635 ntBASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
DEPDC4Q8N2C3 MITF-214ENST00000472437 1995 ntAPPRIS ALT1 TSL 2 BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 CDK15-203ENST00000434439 2240 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 AL161787.1-201ENST00000401543 174 ntBASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 MIR1302-11-201ENST00000408051 138 ntBASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 MIR1302-9-201ENST00000408365 138 ntBASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 MIR1302-10-201ENST00000408734 138 ntBASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 RNU6-908P-201ENST00000410160 94 ntBASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 RNU2-8P-201ENST00000410727 190 ntBASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 RSU1P3-201ENST00000412878 835 ntBASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 JKAMPP1-201ENST00000413804 919 ntBASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 AL773545.3-201ENST00000414297 706 ntBASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 RBMY2FP-202ENST00000420346 1263 ntBASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 PGAM1P3-201ENST00000420790 565 ntBASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 AL445669.1-201ENST00000426743 755 ntBASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 TUBB4BP6-201ENST00000437576 479 ntBASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 RPL17P49-201ENST00000443728 411 ntBASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 RPS23P9-201ENST00000448848 438 ntBASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 MTND1P12-201ENST00000455231 147 ntBASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 AC013356.1-201ENST00000489027 564 ntBASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 AC023794.3-204ENST00000510754 236 ntBASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 RNU6-488P-201ENST00000515918 99 ntBASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 Y_RNA.675-201ENST00000516389 149 ntBASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 RNU6-1153P-201ENST00000516760 105 ntBASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 AP005597.2-201ENST00000526238 341 ntBASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 VDAC2P2-201ENST00000544463 901 ntBASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms