Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.75□□□□□ -1.49
CCDC65Q8IXS2 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC65Q8IXS2 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.75□□□□□ -1.49
CCDC65Q8IXS2 AC011493.1-201ENST00000596753 1632 ntBASIC5.75□□□□□ -1.49
CCDC65Q8IXS2 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC65Q8IXS2 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC65Q8IXS2 AL390316.1-201ENST00000406279 553 ntBASIC5.75□□□□□ -1.49
CCDC65Q8IXS2 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC65Q8IXS2 EI24P4-201ENST00000423683 1078 ntBASIC5.75□□□□□ -1.49
CCDC65Q8IXS2 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC65Q8IXS2 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC65Q8IXS2 AC002553.2-201ENST00000453217 340 ntBASIC5.75□□□□□ -1.49
CCDC65Q8IXS2 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC65Q8IXS2 MYL12BP2-201ENST00000503948 512 ntBASIC5.75□□□□□ -1.49
CCDC65Q8IXS2 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC65Q8IXS2 AC024558.1-201ENST00000505008 528 ntBASIC5.75□□□□□ -1.49
CCDC65Q8IXS2 AC097173.1-201ENST00000505862 819 ntBASIC5.75□□□□□ -1.49
CCDC65Q8IXS2 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC65Q8IXS2 AC024940.3-201ENST00000538551 316 ntBASIC5.75□□□□□ -1.49
CCDC65Q8IXS2 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.75□□□□□ -1.49
CCDC65Q8IXS2 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC65Q8IXS2 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC65Q8IXS2 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC65Q8IXS2 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC65Q8IXS2 BNIP3P35-201ENST00000604530 490 ntBASIC5.75□□□□□ -1.49
CCDC65Q8IXS2 AP000864.1-201ENST00000609424 650 ntBASIC5.75□□□□□ -1.49
CCDC65Q8IXS2 AL589935.2-201ENST00000616471 1231 ntBASIC5.75□□□□□ -1.49
CCDC65Q8IXS2 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC65Q8IXS2 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CCDC65Q8IXS2 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC65Q8IXS2 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC65Q8IXS2 AC021242.1-201ENST00000507315 2035 ntBASIC5.75□□□□□ -1.49
CCDC65Q8IXS2 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC65Q8IXS2 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC65Q8IXS2 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC65Q8IXS2 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC65Q8IXS2 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC65Q8IXS2 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC65Q8IXS2 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC65Q8IXS2 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC65Q8IXS2 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC65Q8IXS2 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.74□□□□□ -1.49
CCDC65Q8IXS2 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CCDC65Q8IXS2 RNU4-44P-201ENST00000363050 141 ntBASIC5.74□□□□□ -1.49
CCDC65Q8IXS2 AL391361.1-201ENST00000405580 489 ntBASIC5.74□□□□□ -1.49
CCDC65Q8IXS2 MIR1182-201ENST00000408363 97 ntBASIC5.74□□□□□ -1.49
CCDC65Q8IXS2 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC65Q8IXS2 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC65Q8IXS2 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC65Q8IXS2 AL589765.3-201ENST00000446084 462 ntBASIC5.74□□□□□ -1.49
CCDC65Q8IXS2 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC65Q8IXS2 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC65Q8IXS2 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
CCDC65Q8IXS2 RNA5SP230-201ENST00000517039 122 ntBASIC5.74□□□□□ -1.49
CCDC65Q8IXS2 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC65Q8IXS2 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC65Q8IXS2 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC65Q8IXS2 AC134349.2-201ENST00000535136 910 ntBASIC5.74□□□□□ -1.49
CCDC65Q8IXS2 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC65Q8IXS2 AC006349.1-201ENST00000555526 235 ntBASIC5.74□□□□□ -1.49
CCDC65Q8IXS2 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC65Q8IXS2 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC65Q8IXS2 AL139041.1-201ENST00000605480 610 ntBASIC5.74□□□□□ -1.49
CCDC65Q8IXS2 AL512329.2-201ENST00000607350 548 ntBASIC5.74□□□□□ -1.49
CCDC65Q8IXS2 AC008115.4-201ENST00000619780 775 ntBASIC5.74□□□□□ -1.49
CCDC65Q8IXS2 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CCDC65Q8IXS2 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
CCDC65Q8IXS2 AC104623.2-202ENST00000623477 4002 ntBASIC5.74□□□□□ -1.49
CCDC65Q8IXS2 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC65Q8IXS2 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC65Q8IXS2 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CCDC65Q8IXS2 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC65Q8IXS2 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC65Q8IXS2 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC65Q8IXS2 AC235565.1-201ENST00000456962 1325 ntBASIC5.74□□□□□ -1.49
CCDC65Q8IXS2 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC65Q8IXS2 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC65Q8IXS2 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC65Q8IXS2 AC008079.2-201ENST00000623543 20396 ntBASIC5.73□□□□□ -1.49
CCDC65Q8IXS2 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CCDC65Q8IXS2 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.73□□□□□ -1.49
CCDC65Q8IXS2 U3.2-201ENST00000362981 210 ntBASIC5.73□□□□□ -1.49
CCDC65Q8IXS2 RNU1-43P-201ENST00000365052 165 ntBASIC5.73□□□□□ -1.49
CCDC65Q8IXS2 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CCDC65Q8IXS2 MIR1286-201ENST00000408112 78 ntBASIC5.73□□□□□ -1.49
CCDC65Q8IXS2 OR52B5P-201ENST00000435337 951 ntBASIC5.73□□□□□ -1.49
CCDC65Q8IXS2 PPIAP20-201ENST00000449839 135 ntBASIC5.73□□□□□ -1.49
CCDC65Q8IXS2 AL606490.1-201ENST00000452266 765 ntBASIC5.73□□□□□ -1.49
CCDC65Q8IXS2 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.73□□□□□ -1.49
CCDC65Q8IXS2 AC020779.1-201ENST00000478757 796 ntBASIC5.73□□□□□ -1.49
CCDC65Q8IXS2 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
CCDC65Q8IXS2 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC65Q8IXS2 AC007225.2-201ENST00000562529 256 ntBASIC5.73□□□□□ -1.49
CCDC65Q8IXS2 AC127024.5-201ENST00000580085 462 ntBASIC5.73□□□□□ -1.49
CCDC65Q8IXS2 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC65Q8IXS2 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.73□□□□□ -1.49
CCDC65Q8IXS2 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.73□□□□□ -1.49
CCDC65Q8IXS2 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC65Q8IXS2 OR8G7P-201ENST00000616658 848 ntBASIC5.73□□□□□ -1.49
CCDC65Q8IXS2 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms