Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VPS13CQ709C8 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC3.96□□□□□ -1.78
VPS13CQ709C8 SSR3-206ENST00000476217 807 ntTSL 3 BASIC3.96□□□□□ -1.78
VPS13CQ709C8 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC3.96□□□□□ -1.78
VPS13CQ709C8 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC3.96□□□□□ -1.78
VPS13CQ709C8 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC3.96□□□□□ -1.78
VPS13CQ709C8 RN7SL703P-201ENST00000578485 302 ntBASIC3.96□□□□□ -1.78
VPS13CQ709C8 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC3.96□□□□□ -1.78
VPS13CQ709C8 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC3.96□□□□□ -1.78
VPS13CQ709C8 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
VPS13CQ709C8 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
VPS13CQ709C8 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VPS13CQ709C8 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
VPS13CQ709C8 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC3.96□□□□□ -1.78
VPS13CQ709C8 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.96□□□□□ -1.78
VPS13CQ709C8 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
VPS13CQ709C8 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VPS13CQ709C8 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC3.96□□□□□ -1.78
VPS13CQ709C8 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VPS13CQ709C8 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC3.96□□□□□ -1.78
VPS13CQ709C8 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC3.96□□□□□ -1.78
VPS13CQ709C8 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VPS13CQ709C8 PKD1L3-201ENST00000620267 5199 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VPS13CQ709C8 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VPS13CQ709C8 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VPS13CQ709C8 RNA5SP509-201ENST00000364577 119 ntBASIC3.96□□□□□ -1.78
VPS13CQ709C8 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC3.96□□□□□ -1.78
VPS13CQ709C8 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VPS13CQ709C8 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC3.96□□□□□ -1.78
VPS13CQ709C8 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.96□□□□□ -1.78
VPS13CQ709C8 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.96□□□□□ -1.78
VPS13CQ709C8 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.96□□□□□ -1.78
VPS13CQ709C8 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.96□□□□□ -1.78
VPS13CQ709C8 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VPS13CQ709C8 MUC3A-201ENST00000379458 11226 ntAPPRIS P2 TSL 5 BASIC3.95□□□□□ -1.78
VPS13CQ709C8 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
VPS13CQ709C8 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VPS13CQ709C8 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VPS13CQ709C8 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
VPS13CQ709C8 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VPS13CQ709C8 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VPS13CQ709C8 MIR372-201ENST00000362225 67 ntBASIC3.95□□□□□ -1.78
VPS13CQ709C8 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
VPS13CQ709C8 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC3.95□□□□□ -1.78
VPS13CQ709C8 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS13CQ709C8 RAB9AP4-201ENST00000415230 609 ntBASIC3.95□□□□□ -1.78
VPS13CQ709C8 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC3.95□□□□□ -1.78
VPS13CQ709C8 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC3.95□□□□□ -1.78
VPS13CQ709C8 AC025884.1-201ENST00000556034 378 ntBASIC3.95□□□□□ -1.78
VPS13CQ709C8 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS13CQ709C8 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS13CQ709C8 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS13CQ709C8 AC011815.3-201ENST00000624194 473 ntBASIC3.95□□□□□ -1.78
VPS13CQ709C8 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
VPS13CQ709C8 FREM1-202ENST00000380880 7324 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
VPS13CQ709C8 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
VPS13CQ709C8 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VPS13CQ709C8 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VPS13CQ709C8 RNU1-82P-201ENST00000390851 165 ntBASIC3.95□□□□□ -1.78
VPS13CQ709C8 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VPS13CQ709C8 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS13CQ709C8 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS13CQ709C8 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VPS13CQ709C8 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.95□□□□□ -1.78
VPS13CQ709C8 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC3.95□□□□□ -1.78
VPS13CQ709C8 AC032011.1-201ENST00000611703 1549 ntBASIC3.95□□□□□ -1.78
VPS13CQ709C8 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
VPS13CQ709C8 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VPS13CQ709C8 AC009643.2-201ENST00000603543 1448 ntBASIC3.95□□□□□ -1.78
VPS13CQ709C8 ZNF626-203ENST00000601440 5963 ntTSL 4 BASIC3.95□□□□□ -1.78
VPS13CQ709C8 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
VPS13CQ709C8 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
VPS13CQ709C8 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
VPS13CQ709C8 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VPS13CQ709C8 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC3.95□□□□□ -1.78
VPS13CQ709C8 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC3.94□□□□□ -1.78
VPS13CQ709C8 AC092651.1-201ENST00000426110 312 ntBASIC3.94□□□□□ -1.78
VPS13CQ709C8 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.94□□□□□ -1.78
VPS13CQ709C8 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VPS13CQ709C8 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC3.94□□□□□ -1.78
VPS13CQ709C8 OR8A2P-201ENST00000528631 952 ntBASIC3.94□□□□□ -1.78
VPS13CQ709C8 AC022726.1-201ENST00000587475 207 ntBASIC3.94□□□□□ -1.78
VPS13CQ709C8 AC243756.2-201ENST00000618406 463 ntBASIC3.94□□□□□ -1.78
VPS13CQ709C8 TLN2-211ENST00000636159 7441 ntTSL 5 BASIC3.94□□□□□ -1.78
VPS13CQ709C8 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
VPS13CQ709C8 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC3.94□□□□□ -1.78
VPS13CQ709C8 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VPS13CQ709C8 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC3.94□□□□□ -1.78
VPS13CQ709C8 BX842559.2-201ENST00000451418 605 ntBASIC3.94□□□□□ -1.78
VPS13CQ709C8 PRPF38AP1-201ENST00000451976 933 ntBASIC3.94□□□□□ -1.78
VPS13CQ709C8 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.94□□□□□ -1.78
VPS13CQ709C8 RN7SL810P-201ENST00000493031 276 ntBASIC3.94□□□□□ -1.78
VPS13CQ709C8 RPL36AP41-201ENST00000493820 306 ntBASIC3.94□□□□□ -1.78
VPS13CQ709C8 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC3.94□□□□□ -1.78
VPS13CQ709C8 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC3.94□□□□□ -1.78
VPS13CQ709C8 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.94□□□□□ -1.78
VPS13CQ709C8 AL161756.2-201ENST00000604597 246 ntBASIC3.94□□□□□ -1.78
VPS13CQ709C8 AC108359.1-201ENST00000616451 1211 ntBASIC3.94□□□□□ -1.78
VPS13CQ709C8 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VPS13CQ709C8 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms