Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 WDR78-207ENST00000488333 613 ntTSL 3 BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 HMGN1P9-201ENST00000515212 298 ntBASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 RNU6-1102P-201ENST00000516149 96 ntBASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 ZKSCAN7P1-201ENST00000543668 673 ntBASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 AGGF1P5-201ENST00000567900 919 ntBASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 MIR4505-201ENST00000582238 73 ntBASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 MIR4310-201ENST00000582950 57 ntBASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 MTATP6P2-201ENST00000603319 678 ntBASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 AC244107.2-201ENST00000611773 76 ntBASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 AC009159.2-201ENST00000617603 606 ntBASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 AC022079.1-201ENST00000621546 602 ntBASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 SNORA11.3-201ENST00000408471 128 ntBASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 OR2AT2P-201ENST00000413438 905 ntBASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 AL136231.1-201ENST00000429407 730 ntBASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 AL512637.2-201ENST00000431287 1256 ntBASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 NPM1P48-201ENST00000436002 853 ntBASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 AL390119.1-201ENST00000440329 312 ntBASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 AC090804.1-201ENST00000448870 490 ntBASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 CBX1P2-201ENST00000453841 458 ntBASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 MTCO2P9-201ENST00000503214 694 ntBASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 MTND6P2-201ENST00000512226 524 ntBASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 AC092709.1-201ENST00000521355 1045 ntBASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 MIR1273E-201ENST00000581165 102 ntBASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 KATNBL1P5-201ENST00000605015 517 ntBASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 Z99289.3-201ENST00000605586 594 ntBASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 SNORA11.6-201ENST00000619030 128 ntBASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 AC095038.2-201ENST00000621464 1070 ntBASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 AC009120.7-201ENST00000623452 780 ntBASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 AL078595.3-201ENST00000623815 1166 ntBASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 AC068787.1-201ENST00000623908 691 ntBASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 AC099654.6-201ENST00000636487 512 ntBASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
ZNF549Q6P9A3 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms