Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.72□□□□□ -1.49
RNF220Q5VTB9 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 HIGD1AP15-201ENST00000416198 280 ntBASIC5.72□□□□□ -1.49
RNF220Q5VTB9 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 NMD3P2-201ENST00000421815 761 ntBASIC5.72□□□□□ -1.49
RNF220Q5VTB9 XKRYP1-201ENST00000423438 492 ntBASIC5.72□□□□□ -1.49
RNF220Q5VTB9 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 RPS7P14-201ENST00000426405 583 ntBASIC5.72□□□□□ -1.49
RNF220Q5VTB9 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 XKRYP2-201ENST00000432915 492 ntBASIC5.72□□□□□ -1.49
RNF220Q5VTB9 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 HMGB3P6-201ENST00000444896 598 ntBASIC5.72□□□□□ -1.49
RNF220Q5VTB9 POU5F1P5-201ENST00000445059 658 ntBASIC5.72□□□□□ -1.49
RNF220Q5VTB9 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.72□□□□□ -1.49
RNF220Q5VTB9 AC005002.1-201ENST00000447458 540 ntBASIC5.72□□□□□ -1.49
RNF220Q5VTB9 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 PPIAP32-201ENST00000449940 472 ntBASIC5.72□□□□□ -1.49
RNF220Q5VTB9 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 HMGB1P4-201ENST00000455362 567 ntBASIC5.72□□□□□ -1.49
RNF220Q5VTB9 RN7SL39P-201ENST00000462264 297 ntBASIC5.72□□□□□ -1.49
RNF220Q5VTB9 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 EIF3LP3-201ENST00000495197 822 ntBASIC5.72□□□□□ -1.49
RNF220Q5VTB9 PRELID3BP5-201ENST00000508612 460 ntBASIC5.72□□□□□ -1.49
RNF220Q5VTB9 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 AC124293.1-201ENST00000530034 493 ntBASIC5.72□□□□□ -1.49
RNF220Q5VTB9 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 AC018552.1-201ENST00000562099 811 ntBASIC5.72□□□□□ -1.49
RNF220Q5VTB9 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 MIR3157-201ENST00000578688 85 ntBASIC5.72□□□□□ -1.49
RNF220Q5VTB9 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 AC007786.3-201ENST00000615154 596 ntBASIC5.72□□□□□ -1.49
RNF220Q5VTB9 U6.48-201ENST00000618523 106 ntBASIC5.72□□□□□ -1.49
RNF220Q5VTB9 AC006386.1-201ENST00000619436 415 ntBASIC5.72□□□□□ -1.49
RNF220Q5VTB9 AC006840.1-201ENST00000623069 542 ntBASIC5.72□□□□□ -1.49
RNF220Q5VTB9 AC022400.9-201ENST00000623633 273 ntBASIC5.72□□□□□ -1.49
RNF220Q5VTB9 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 OR6C71P-202ENST00000641886 1107 ntBASIC5.72□□□□□ -1.49
RNF220Q5VTB9 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 RNF6P1-201ENST00000444889 1784 ntBASIC5.72□□□□□ -1.49
RNF220Q5VTB9 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF220Q5VTB9 MTND4P31-201ENST00000425607 1343 ntBASIC5.72□□□□□ -1.49
RNF220Q5VTB9 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
RNF220Q5VTB9 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.71□□□□□ -1.49
RNF220Q5VTB9 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.49
RNF220Q5VTB9 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RNF220Q5VTB9 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RNF220Q5VTB9 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
RNF220Q5VTB9 MTCO1P6-201ENST00000481192 1384 ntBASIC5.71□□□□□ -1.5
RNF220Q5VTB9 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
RNF220Q5VTB9 CASC19-246ENST00000641625 1606 ntBASIC5.71□□□□□ -1.5
RNF220Q5VTB9 AC097063.1-201ENST00000426714 1797 ntBASIC5.71□□□□□ -1.5
RNF220Q5VTB9 RNU1-49P-201ENST00000363468 159 ntBASIC5.71□□□□□ -1.5
RNF220Q5VTB9 RNA5SP346-201ENST00000363541 121 ntBASIC5.71□□□□□ -1.5
RNF220Q5VTB9 MIR1303-201ENST00000408625 86 ntBASIC5.71□□□□□ -1.5
RNF220Q5VTB9 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.71□□□□□ -1.5
RNF220Q5VTB9 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.71□□□□□ -1.5
RNF220Q5VTB9 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF220Q5VTB9 GTF2IP2-201ENST00000424290 697 ntBASIC5.71□□□□□ -1.5
RNF220Q5VTB9 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF220Q5VTB9 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RNF220Q5VTB9 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF220Q5VTB9 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF220Q5VTB9 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF220Q5VTB9 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF220Q5VTB9 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.71□□□□□ -1.5
RNF220Q5VTB9 PPIAP10-201ENST00000438675 458 ntBASIC5.71□□□□□ -1.5
RNF220Q5VTB9 AC009263.1-201ENST00000441193 1239 ntBASIC5.71□□□□□ -1.5
RNF220Q5VTB9 MTCYBP42-201ENST00000444653 1130 ntBASIC5.71□□□□□ -1.5
RNF220Q5VTB9 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.71□□□□□ -1.5
RNF220Q5VTB9 RPL23AP12-201ENST00000467573 473 ntBASIC5.71□□□□□ -1.5
RNF220Q5VTB9 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.71□□□□□ -1.5
RNF220Q5VTB9 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF220Q5VTB9 AC091860.1-201ENST00000505723 432 ntBASIC5.71□□□□□ -1.5
RNF220Q5VTB9 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC5.71□□□□□ -1.5
RNF220Q5VTB9 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF220Q5VTB9 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF220Q5VTB9 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF220Q5VTB9 DEFB130C-202ENST00000530001 230 ntBASIC5.71□□□□□ -1.5
RNF220Q5VTB9 NANOGNBP2-201ENST00000544753 553 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms