Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 UBTFL6-201ENST00000477929 1024 ntBASIC8.39□□□□□ -1.07
RC3H1Q5TC82 AP002453.1-201ENST00000492327 668 ntBASIC8.39□□□□□ -1.07
RC3H1Q5TC82 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC8.39□□□□□ -1.07
RC3H1Q5TC82 AC112225.1-201ENST00000508230 297 ntBASIC8.39□□□□□ -1.07
RC3H1Q5TC82 AC010587.2-201ENST00000511727 448 ntBASIC8.39□□□□□ -1.07
RC3H1Q5TC82 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC8.39□□□□□ -1.07
RC3H1Q5TC82 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC8.39□□□□□ -1.07
RC3H1Q5TC82 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC8.39□□□□□ -1.07
RC3H1Q5TC82 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
RC3H1Q5TC82 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC8.39□□□□□ -1.07
RC3H1Q5TC82 PSMA3P-201ENST00000555485 635 ntBASIC8.39□□□□□ -1.07
RC3H1Q5TC82 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC8.39□□□□□ -1.07
RC3H1Q5TC82 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC8.39□□□□□ -1.07
RC3H1Q5TC82 AC087477.6-201ENST00000559595 843 ntBASIC8.39□□□□□ -1.07
RC3H1Q5TC82 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
RC3H1Q5TC82 MIR4795-201ENST00000584182 89 ntBASIC8.39□□□□□ -1.07
RC3H1Q5TC82 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC8.39□□□□□ -1.07
RC3H1Q5TC82 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC8.39□□□□□ -1.07
RC3H1Q5TC82 AC019193.2-201ENST00000610012 634 ntBASIC8.39□□□□□ -1.07
RC3H1Q5TC82 AL080312.2-201ENST00000613001 630 ntBASIC8.39□□□□□ -1.07
RC3H1Q5TC82 AC022509.4-201ENST00000621404 572 ntBASIC8.39□□□□□ -1.07
RC3H1Q5TC82 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC8.39□□□□□ -1.07
RC3H1Q5TC82 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC8.39□□□□□ -1.07
RC3H1Q5TC82 LINC02495-203ENST00000636704 242 ntBASIC8.39□□□□□ -1.07
RC3H1Q5TC82 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
RC3H1Q5TC82 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC8.39□□□□□ -1.07
RC3H1Q5TC82 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC8.39□□□□□ -1.07
RC3H1Q5TC82 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC8.39□□□□□ -1.07
RC3H1Q5TC82 GLYATL1P1-201ENST00000528297 1607 ntBASIC8.39□□□□□ -1.07
RC3H1Q5TC82 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
RC3H1Q5TC82 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC8.39□□□□□ -1.07
RC3H1Q5TC82 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
RC3H1Q5TC82 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC8.39□□□□□ -1.07
RC3H1Q5TC82 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
RC3H1Q5TC82 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 TMC3-AS1-206ENST00000612811 2726 ntBASIC8.38□□□□□ -1.07
RC3H1Q5TC82 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 EEF1A1P30-201ENST00000429708 1315 ntBASIC8.38□□□□□ -1.07
RC3H1Q5TC82 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 TAF9BP1-201ENST00000396646 746 ntBASIC8.38□□□□□ -1.07
RC3H1Q5TC82 AL157702.1-201ENST00000398764 426 ntBASIC8.38□□□□□ -1.07
RC3H1Q5TC82 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 AC104843.2-201ENST00000427666 297 ntBASIC8.38□□□□□ -1.07
RC3H1Q5TC82 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 ZYG11AP1-201ENST00000430329 837 ntBASIC8.38□□□□□ -1.07
RC3H1Q5TC82 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 AL035458.1-201ENST00000433096 585 ntBASIC8.38□□□□□ -1.07
RC3H1Q5TC82 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 SEPHS1P4-201ENST00000446112 1176 ntBASIC8.38□□□□□ -1.07
RC3H1Q5TC82 AL627224.1-201ENST00000448334 444 ntBASIC8.38□□□□□ -1.07
RC3H1Q5TC82 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 SETP20-201ENST00000457046 852 ntBASIC8.38□□□□□ -1.07
RC3H1Q5TC82 AC068228.1-201ENST00000461723 211 ntBASIC8.38□□□□□ -1.07
RC3H1Q5TC82 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 SUMO1P1-201ENST00000497904 306 ntBASIC8.38□□□□□ -1.07
RC3H1Q5TC82 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 AC021678.1-201ENST00000505195 936 ntBASIC8.38□□□□□ -1.07
RC3H1Q5TC82 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 CYCSP38-201ENST00000559840 322 ntBASIC8.38□□□□□ -1.07
RC3H1Q5TC82 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 AL133457.1-201ENST00000564251 987 ntBASIC8.38□□□□□ -1.07
RC3H1Q5TC82 RN7SL208P-201ENST00000577964 296 ntBASIC8.38□□□□□ -1.07
RC3H1Q5TC82 RPSAP75-201ENST00000605848 301 ntBASIC8.38□□□□□ -1.07
RC3H1Q5TC82 AC106028.5-201ENST00000610332 395 ntBASIC8.38□□□□□ -1.07
RC3H1Q5TC82 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 AL133370.2-201ENST00000619934 439 ntBASIC8.38□□□□□ -1.07
RC3H1Q5TC82 AC099063.3-201ENST00000642066 185 ntBASIC8.38□□□□□ -1.07
RC3H1Q5TC82 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 MAPK10-383ENST00000642032 3390 ntBASIC8.38□□□□□ -1.07
RC3H1Q5TC82 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 DPY19L1P1-201ENST00000417811 2594 ntBASIC8.38□□□□□ -1.07
RC3H1Q5TC82 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
RC3H1Q5TC82 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC8.38□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms