Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC38Q502W7 MTND4P9-201ENST00000507819 1346 ntBASIC5.91□□□□□ -1.46
CCDC38Q502W7 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC38Q502W7 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC38Q502W7 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC38Q502W7 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC38Q502W7 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC38Q502W7 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC38Q502W7 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
CCDC38Q502W7 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC38Q502W7 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.9□□□□□ -1.46
CCDC38Q502W7 LYARP1-201ENST00000436977 1501 ntBASIC5.9□□□□□ -1.46
CCDC38Q502W7 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC38Q502W7 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
CCDC38Q502W7 AF287957.1-201ENST00000607368 1595 ntBASIC5.9□□□□□ -1.46
CCDC38Q502W7 BRAFP1-201ENST00000445336 2703 ntBASIC5.9□□□□□ -1.46
CCDC38Q502W7 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC38Q502W7 COX6B1P3-201ENST00000312310 260 ntBASIC5.9□□□□□ -1.46
CCDC38Q502W7 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC38Q502W7 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC38Q502W7 RNU1-136P-201ENST00000384181 164 ntBASIC5.9□□□□□ -1.46
CCDC38Q502W7 RN7SKP222-201ENST00000410651 315 ntBASIC5.9□□□□□ -1.46
CCDC38Q502W7 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC38Q502W7 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC38Q502W7 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC38Q502W7 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC5.9□□□□□ -1.46
CCDC38Q502W7 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC38Q502W7 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC38Q502W7 AMYP1-201ENST00000440059 1023 ntBASIC5.9□□□□□ -1.46
CCDC38Q502W7 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC38Q502W7 AL035551.1-201ENST00000446931 348 ntBASIC5.9□□□□□ -1.46
CCDC38Q502W7 HMGN1P5-201ENST00000448591 263 ntBASIC5.9□□□□□ -1.46
CCDC38Q502W7 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC38Q502W7 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC38Q502W7 CST12P-201ENST00000457644 362 ntBASIC5.9□□□□□ -1.46
CCDC38Q502W7 AC009963.3-201ENST00000458090 486 ntBASIC5.9□□□□□ -1.46
CCDC38Q502W7 AC023194.2-201ENST00000465398 406 ntBASIC5.9□□□□□ -1.46
CCDC38Q502W7 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC38Q502W7 AC092865.4-201ENST00000477936 615 ntBASIC5.9□□□□□ -1.46
CCDC38Q502W7 RPL5P22-201ENST00000480199 884 ntBASIC5.9□□□□□ -1.46
CCDC38Q502W7 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC38Q502W7 RN7SL170P-201ENST00000487098 295 ntBASIC5.9□□□□□ -1.46
CCDC38Q502W7 RBBP4P1-201ENST00000502424 1276 ntBASIC5.9□□□□□ -1.46
CCDC38Q502W7 PPM1AP1-201ENST00000502740 1135 ntBASIC5.9□□□□□ -1.46
CCDC38Q502W7 OR5H3P-201ENST00000502817 919 ntBASIC5.9□□□□□ -1.46
CCDC38Q502W7 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC38Q502W7 PRMT5P1-201ENST00000514351 598 ntBASIC5.9□□□□□ -1.46
CCDC38Q502W7 MTCO3P27-201ENST00000514397 196 ntBASIC5.9□□□□□ -1.46
CCDC38Q502W7 GAPDHP62-201ENST00000515313 990 ntBASIC5.9□□□□□ -1.46
CCDC38Q502W7 RN7SKP70-201ENST00000516655 271 ntBASIC5.9□□□□□ -1.46
CCDC38Q502W7 AC011853.1-201ENST00000518911 454 ntBASIC5.9□□□□□ -1.46
CCDC38Q502W7 AP003355.1-201ENST00000518956 587 ntBASIC5.9□□□□□ -1.46
CCDC38Q502W7 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC38Q502W7 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.9□□□□□ -1.46
CCDC38Q502W7 LSM3P2-201ENST00000551246 273 ntBASIC5.9□□□□□ -1.46
CCDC38Q502W7 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC38Q502W7 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC38Q502W7 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC38Q502W7 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC38Q502W7 AC106734.1-201ENST00000568646 663 ntBASIC5.9□□□□□ -1.46
CCDC38Q502W7 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.9□□□□□ -1.46
CCDC38Q502W7 DPRXP4-201ENST00000578053 568 ntBASIC5.9□□□□□ -1.46
CCDC38Q502W7 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC38Q502W7 AC079610.2-201ENST00000604818 690 ntBASIC5.9□□□□□ -1.46
CCDC38Q502W7 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC38Q502W7 AC108673.3-201ENST00000609183 335 ntBASIC5.9□□□□□ -1.46
CCDC38Q502W7 AP005229.2-201ENST00000609980 697 ntBASIC5.9□□□□□ -1.46
CCDC38Q502W7 AC008759.3-201ENST00000613300 508 ntBASIC5.9□□□□□ -1.46
CCDC38Q502W7 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC38Q502W7 AL139099.4-201ENST00000614802 114 ntBASIC5.9□□□□□ -1.46
CCDC38Q502W7 BNIP3P41-202ENST00000616656 861 ntBASIC5.9□□□□□ -1.46
CCDC38Q502W7 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC38Q502W7 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC38Q502W7 AC010435.1-201ENST00000623353 1177 ntBASIC5.9□□□□□ -1.46
CCDC38Q502W7 AC099654.6-201ENST00000636487 512 ntBASIC5.9□□□□□ -1.46
CCDC38Q502W7 AL590396.2-201ENST00000636511 1041 ntBASIC5.9□□□□□ -1.46
CCDC38Q502W7 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC38Q502W7 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CCDC38Q502W7 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CCDC38Q502W7 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.9□□□□□ -1.47
CCDC38Q502W7 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.9□□□□□ -1.47
CCDC38Q502W7 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
CCDC38Q502W7 QRSL1P1-201ENST00000400977 1540 ntBASIC5.89□□□□□ -1.47
CCDC38Q502W7 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
CCDC38Q502W7 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC38Q502W7 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC38Q502W7 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
CCDC38Q502W7 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC38Q502W7 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC38Q502W7 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.89□□□□□ -1.47
CCDC38Q502W7 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CCDC38Q502W7 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC38Q502W7 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
CCDC38Q502W7 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.89□□□□□ -1.47
CCDC38Q502W7 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC38Q502W7 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CCDC38Q502W7 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.89□□□□□ -1.47
CCDC38Q502W7 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC38Q502W7 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
CCDC38Q502W7 HMGB1P13-201ENST00000406019 642 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms