Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 Z93019.1-201ENST00000416450 973 ntBASIC4.8□□□□□ -1.64
RFX4Q33E94 TMBIM7P-201ENST00000418074 855 ntBASIC4.8□□□□□ -1.64
RFX4Q33E94 RPS3P2-201ENST00000421346 701 ntBASIC4.8□□□□□ -1.64
RFX4Q33E94 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.8□□□□□ -1.64
RFX4Q33E94 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RFX4Q33E94 AL139148.1-201ENST00000427122 680 ntBASIC4.8□□□□□ -1.64
RFX4Q33E94 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.8□□□□□ -1.64
RFX4Q33E94 COX6CP13-201ENST00000428703 226 ntBASIC4.8□□□□□ -1.64
RFX4Q33E94 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.8□□□□□ -1.64
RFX4Q33E94 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.8□□□□□ -1.64
RFX4Q33E94 AL356981.1-201ENST00000454879 684 ntBASIC4.8□□□□□ -1.64
RFX4Q33E94 AC093166.2-201ENST00000455969 1017 ntBASIC4.8□□□□□ -1.64
RFX4Q33E94 AL445433.1-201ENST00000457507 257 ntBASIC4.8□□□□□ -1.64
RFX4Q33E94 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.8□□□□□ -1.64
RFX4Q33E94 AC020890.1-201ENST00000491837 504 ntBASIC4.8□□□□□ -1.64
RFX4Q33E94 AC005412.2-201ENST00000492004 341 ntBASIC4.8□□□□□ -1.64
RFX4Q33E94 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.8□□□□□ -1.64
RFX4Q33E94 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.8□□□□□ -1.64
RFX4Q33E94 ENPP7P9-201ENST00000514456 627 ntBASIC4.8□□□□□ -1.64
RFX4Q33E94 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.8□□□□□ -1.64
RFX4Q33E94 HNRNPRP2-201ENST00000528421 743 ntBASIC4.8□□□□□ -1.64
RFX4Q33E94 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RFX4Q33E94 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.8□□□□□ -1.64
RFX4Q33E94 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.8□□□□□ -1.64
RFX4Q33E94 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.8□□□□□ -1.64
RFX4Q33E94 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.8□□□□□ -1.64
RFX4Q33E94 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RFX4Q33E94 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.8□□□□□ -1.64
RFX4Q33E94 RNF138P2-201ENST00000603490 592 ntBASIC4.8□□□□□ -1.64
RFX4Q33E94 AC100767.2-201ENST00000604840 693 ntBASIC4.8□□□□□ -1.64
RFX4Q33E94 AL161912.3-201ENST00000605404 628 ntBASIC4.8□□□□□ -1.64
RFX4Q33E94 SNORD91B-202ENST00000608459 222 ntBASIC4.8□□□□□ -1.64
RFX4Q33E94 AC118658.2-201ENST00000618697 459 ntBASIC4.8□□□□□ -1.64
RFX4Q33E94 AC074140.1-201ENST00000621617 208 ntBASIC4.8□□□□□ -1.64
RFX4Q33E94 AP003072.5-201ENST00000623872 773 ntBASIC4.8□□□□□ -1.64
RFX4Q33E94 CU639417.4-201ENST00000623928 207 ntBASIC4.8□□□□□ -1.64
RFX4Q33E94 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.8□□□□□ -1.64
RFX4Q33E94 AC126323.6-202ENST00000568092 3511 ntBASIC4.8□□□□□ -1.64
RFX4Q33E94 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RFX4Q33E94 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RFX4Q33E94 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RFX4Q33E94 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.8□□□□□ -1.64
RFX4Q33E94 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.8□□□□□ -1.64
RFX4Q33E94 AC092111.2-201ENST00000611627 1414 ntBASIC4.8□□□□□ -1.64
RFX4Q33E94 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.8□□□□□ -1.64
RFX4Q33E94 AC083843.3-201ENST00000623679 2186 ntBASIC4.8□□□□□ -1.64
RFX4Q33E94 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.79□□□□□ -1.64
RFX4Q33E94 BTBD10P1-201ENST00000549824 1352 ntBASIC4.79□□□□□ -1.64
RFX4Q33E94 CASC19-221ENST00000641309 1382 ntBASIC4.79□□□□□ -1.64
RFX4Q33E94 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RFX4Q33E94 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.79□□□□□ -1.64
RFX4Q33E94 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RFX4Q33E94 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
RFX4Q33E94 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.79□□□□□ -1.64
RFX4Q33E94 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RFX4Q33E94 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RFX4Q33E94 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
RFX4Q33E94 RNU1-146P-201ENST00000364015 165 ntBASIC4.79□□□□□ -1.64
RFX4Q33E94 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RFX4Q33E94 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC4.79□□□□□ -1.64
RFX4Q33E94 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
RFX4Q33E94 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
RFX4Q33E94 RNA5SP122-201ENST00000384457 108 ntBASIC4.79□□□□□ -1.64
RFX4Q33E94 OR6E1P-201ENST00000414424 923 ntBASIC4.79□□□□□ -1.64
RFX4Q33E94 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RFX4Q33E94 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.79□□□□□ -1.64
RFX4Q33E94 GAPDHP34-201ENST00000432112 823 ntBASIC4.79□□□□□ -1.64
RFX4Q33E94 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.79□□□□□ -1.64
RFX4Q33E94 NPM1P33-201ENST00000438918 872 ntBASIC4.79□□□□□ -1.64
RFX4Q33E94 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.79□□□□□ -1.64
RFX4Q33E94 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RFX4Q33E94 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.79□□□□□ -1.64
RFX4Q33E94 AC138866.2-201ENST00000508650 584 ntBASIC4.79□□□□□ -1.64
RFX4Q33E94 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.79□□□□□ -1.64
RFX4Q33E94 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC4.79□□□□□ -1.64
RFX4Q33E94 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.79□□□□□ -1.64
RFX4Q33E94 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.79□□□□□ -1.64
RFX4Q33E94 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.79□□□□□ -1.64
RFX4Q33E94 AC008814.1-201ENST00000603797 406 ntBASIC4.79□□□□□ -1.64
RFX4Q33E94 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RFX4Q33E94 OR8A1-204ENST00000642111 1145 ntBASIC4.79□□□□□ -1.64
RFX4Q33E94 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RFX4Q33E94 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RFX4Q33E94 FGG-201ENST00000336098 1659 ntTSL 2 BASIC4.79□□□□□ -1.64
RFX4Q33E94 MAPK10-349ENST00000641767 3661 ntBASIC4.79□□□□□ -1.64
RFX4Q33E94 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.79□□□□□ -1.64
RFX4Q33E94 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.79□□□□□ -1.64
RFX4Q33E94 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RFX4Q33E94 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RFX4Q33E94 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RFX4Q33E94 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.78□□□□□ -1.64
RFX4Q33E94 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.78□□□□□ -1.64
RFX4Q33E94 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.78□□□□□ -1.64
RFX4Q33E94 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RFX4Q33E94 SCARNA15-201ENST00000607520 4325 ntBASIC4.78□□□□□ -1.64
RFX4Q33E94 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RFX4Q33E94 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RFX4Q33E94 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.78□□□□□ -1.64
RFX4Q33E94 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RFX4Q33E94 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms