Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.18□□□□□ -1.42
RFX7Q2KHR2 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC6.18□□□□□ -1.42
RFX7Q2KHR2 MYLK-221ENST00000583087 678 ntTSL 4 BASIC6.18□□□□□ -1.42
RFX7Q2KHR2 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC6.18□□□□□ -1.42
RFX7Q2KHR2 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC6.18□□□□□ -1.42
RFX7Q2KHR2 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC6.18□□□□□ -1.42
RFX7Q2KHR2 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RFX7Q2KHR2 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
RFX7Q2KHR2 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RFX7Q2KHR2 AC011755.1-201ENST00000623763 2049 ntBASIC6.18□□□□□ -1.42
RFX7Q2KHR2 AC007996.1-201ENST00000620414 2821 ntBASIC6.18□□□□□ -1.42
RFX7Q2KHR2 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RFX7Q2KHR2 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RFX7Q2KHR2 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RFX7Q2KHR2 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC6.18□□□□□ -1.42
RFX7Q2KHR2 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC6.18□□□□□ -1.42
RFX7Q2KHR2 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.18□□□□□ -1.42
RFX7Q2KHR2 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RFX7Q2KHR2 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RFX7Q2KHR2 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
RFX7Q2KHR2 SNORA77-201ENST00000408716 125 ntBASIC6.18□□□□□ -1.42
RFX7Q2KHR2 PCNPP4-201ENST00000414817 517 ntBASIC6.18□□□□□ -1.42
RFX7Q2KHR2 COX6B1P1-201ENST00000415962 213 ntBASIC6.18□□□□□ -1.42
RFX7Q2KHR2 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC6.18□□□□□ -1.42
RFX7Q2KHR2 OR2AM1P-201ENST00000422137 422 ntBASIC6.18□□□□□ -1.42
RFX7Q2KHR2 MRPS21P2-201ENST00000424704 264 ntBASIC6.18□□□□□ -1.42
RFX7Q2KHR2 RPL31P44-201ENST00000447680 377 ntBASIC6.18□□□□□ -1.42
RFX7Q2KHR2 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC6.18□□□□□ -1.42
RFX7Q2KHR2 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.18□□□□□ -1.42
RFX7Q2KHR2 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.18□□□□□ -1.42
RFX7Q2KHR2 MYL12BP2-201ENST00000503948 512 ntBASIC6.18□□□□□ -1.42
RFX7Q2KHR2 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.18□□□□□ -1.42
RFX7Q2KHR2 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC6.18□□□□□ -1.42
RFX7Q2KHR2 AC009117.1-201ENST00000563948 554 ntBASIC6.18□□□□□ -1.42
RFX7Q2KHR2 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC6.18□□□□□ -1.42
RFX7Q2KHR2 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC6.18□□□□□ -1.42
RFX7Q2KHR2 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC6.18□□□□□ -1.42
RFX7Q2KHR2 AC073575.2-201ENST00000614212 627 ntBASIC6.18□□□□□ -1.42
RFX7Q2KHR2 AC091905.4-201ENST00000623432 202 ntBASIC6.18□□□□□ -1.42
RFX7Q2KHR2 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC6.18□□□□□ -1.42
RFX7Q2KHR2 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RFX7Q2KHR2 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC6.17□□□□□ -1.42
RFX7Q2KHR2 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
RFX7Q2KHR2 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RFX7Q2KHR2 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RFX7Q2KHR2 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.17□□□□□ -1.42
RFX7Q2KHR2 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RFX7Q2KHR2 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
RFX7Q2KHR2 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
RFX7Q2KHR2 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RFX7Q2KHR2 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RFX7Q2KHR2 MIR600-201ENST00000385007 98 ntBASIC6.17□□□□□ -1.42
RFX7Q2KHR2 AL035079.1-201ENST00000405210 287 ntBASIC6.17□□□□□ -1.42
RFX7Q2KHR2 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.17□□□□□ -1.42
RFX7Q2KHR2 BX323845.1-201ENST00000432417 179 ntBASIC6.17□□□□□ -1.42
RFX7Q2KHR2 AL049745.1-201ENST00000433953 286 ntBASIC6.17□□□□□ -1.42
RFX7Q2KHR2 CYCSP24-201ENST00000445119 316 ntBASIC6.17□□□□□ -1.42
RFX7Q2KHR2 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC6.17□□□□□ -1.42
RFX7Q2KHR2 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC6.17□□□□□ -1.42
RFX7Q2KHR2 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.17□□□□□ -1.42
RFX7Q2KHR2 RNA5SP43-201ENST00000516559 110 ntBASIC6.17□□□□□ -1.42
RFX7Q2KHR2 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.17□□□□□ -1.42
RFX7Q2KHR2 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC6.17□□□□□ -1.42
RFX7Q2KHR2 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.17□□□□□ -1.42
RFX7Q2KHR2 AC137768.1-201ENST00000549998 553 ntBASIC6.17□□□□□ -1.42
RFX7Q2KHR2 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC6.17□□□□□ -1.42
RFX7Q2KHR2 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC6.17□□□□□ -1.42
RFX7Q2KHR2 MIR3934-201ENST00000579806 107 ntBASIC6.17□□□□□ -1.42
RFX7Q2KHR2 AL157762.1-201ENST00000619612 415 ntBASIC6.17□□□□□ -1.42
RFX7Q2KHR2 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
RFX7Q2KHR2 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.17□□□□□ -1.42
RFX7Q2KHR2 MAPK10-304ENST00000641341 3984 ntBASIC6.17□□□□□ -1.42
RFX7Q2KHR2 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RFX7Q2KHR2 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
RFX7Q2KHR2 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
RFX7Q2KHR2 OFD1P9Y-201ENST00000417699 1491 ntBASIC6.16□□□□□ -1.42
RFX7Q2KHR2 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
RFX7Q2KHR2 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RFX7Q2KHR2 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RFX7Q2KHR2 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RFX7Q2KHR2 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RFX7Q2KHR2 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
RFX7Q2KHR2 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RFX7Q2KHR2 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RFX7Q2KHR2 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RFX7Q2KHR2 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
RFX7Q2KHR2 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
RFX7Q2KHR2 RN7SKP103-201ENST00000363848 320 ntBASIC6.16□□□□□ -1.42
RFX7Q2KHR2 RNA5SP428-201ENST00000365129 132 ntBASIC6.16□□□□□ -1.42
RFX7Q2KHR2 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RFX7Q2KHR2 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
RFX7Q2KHR2 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
RFX7Q2KHR2 CYB5AP4-201ENST00000396692 399 ntBASIC6.16□□□□□ -1.42
RFX7Q2KHR2 RN7SKP114-201ENST00000410327 279 ntBASIC6.16□□□□□ -1.42
RFX7Q2KHR2 AC007738.1-201ENST00000413892 348 ntBASIC6.16□□□□□ -1.42
RFX7Q2KHR2 GJA6P-201ENST00000415117 1042 ntBASIC6.16□□□□□ -1.42
RFX7Q2KHR2 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC6.16□□□□□ -1.42
RFX7Q2KHR2 MGAT2P2-201ENST00000427194 797 ntBASIC6.16□□□□□ -1.42
RFX7Q2KHR2 COX6CP13-201ENST00000428703 226 ntBASIC6.16□□□□□ -1.42
RFX7Q2KHR2 RPS17P2-201ENST00000461663 408 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms