Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RPS3AP61247 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RPS3AP61247 AC025574.1-201ENST00000554784 1653 ntBASIC5.37□□□□□ -1.55
RPS3AP61247 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
RPS3AP61247 AC007996.1-201ENST00000620414 2821 ntBASIC5.37□□□□□ -1.55
RPS3AP61247 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
RPS3AP61247 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.36□□□□□ -1.55
RPS3AP61247 AL078621.3-201ENST00000623707 2042 ntBASIC5.36□□□□□ -1.55
RPS3AP61247 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
RPS3AP61247 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
RPS3AP61247 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RPS3AP61247 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.36□□□□□ -1.55
RPS3AP61247 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.36□□□□□ -1.55
RPS3AP61247 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RPS3AP61247 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.36□□□□□ -1.55
RPS3AP61247 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
RPS3AP61247 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RPS3AP61247 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RPS3AP61247 RNA5SP477-201ENST00000362639 119 ntBASIC5.36□□□□□ -1.55
RPS3AP61247 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.36□□□□□ -1.55
RPS3AP61247 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
RPS3AP61247 SNORA70.6-201ENST00000383934 134 ntBASIC5.36□□□□□ -1.55
RPS3AP61247 RNU6-185P-201ENST00000384421 107 ntBASIC5.36□□□□□ -1.55
RPS3AP61247 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
RPS3AP61247 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
RPS3AP61247 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
RPS3AP61247 AC010385.1-201ENST00000412374 256 ntBASIC5.36□□□□□ -1.55
RPS3AP61247 AC105402.1-201ENST00000413336 545 ntBASIC5.36□□□□□ -1.55
RPS3AP61247 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.36□□□□□ -1.55
RPS3AP61247 AL158050.1-201ENST00000416077 457 ntBASIC5.36□□□□□ -1.55
RPS3AP61247 BX284632.2-201ENST00000421091 399 ntBASIC5.36□□□□□ -1.55
RPS3AP61247 VN1R42P-201ENST00000424651 344 ntBASIC5.36□□□□□ -1.55
RPS3AP61247 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.36□□□□□ -1.55
RPS3AP61247 AC099677.3-201ENST00000427081 395 ntBASIC5.36□□□□□ -1.55
RPS3AP61247 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.36□□□□□ -1.55
RPS3AP61247 MTCO1P52-201ENST00000433928 531 ntBASIC5.36□□□□□ -1.55
RPS3AP61247 AL445928.1-201ENST00000435545 222 ntBASIC5.36□□□□□ -1.55
RPS3AP61247 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.36□□□□□ -1.55
RPS3AP61247 VN1R110P-201ENST00000438988 971 ntBASIC5.36□□□□□ -1.55
RPS3AP61247 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.36□□□□□ -1.55
RPS3AP61247 AL512605.1-202ENST00000441919 381 ntBASIC5.36□□□□□ -1.55
RPS3AP61247 AL359955.2-201ENST00000445380 353 ntBASIC5.36□□□□□ -1.55
RPS3AP61247 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RPS3AP61247 GEMIN2P1-201ENST00000454246 752 ntBASIC5.36□□□□□ -1.55
RPS3AP61247 RPS20P4-201ENST00000461659 355 ntBASIC5.36□□□□□ -1.55
RPS3AP61247 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC5.36□□□□□ -1.55
RPS3AP61247 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.36□□□□□ -1.55
RPS3AP61247 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.36□□□□□ -1.55
RPS3AP61247 Y_RNA.667-201ENST00000516212 107 ntBASIC5.36□□□□□ -1.55
RPS3AP61247 RNA5SP271-201ENST00000516700 88 ntBASIC5.36□□□□□ -1.55
RPS3AP61247 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RPS3AP61247 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.36□□□□□ -1.55
RPS3AP61247 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.36□□□□□ -1.55
RPS3AP61247 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.36□□□□□ -1.55
RPS3AP61247 AC125612.1-201ENST00000547580 377 ntBASIC5.36□□□□□ -1.55
RPS3AP61247 AC126615.2-201ENST00000553003 515 ntBASIC5.36□□□□□ -1.55
RPS3AP61247 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.36□□□□□ -1.55
RPS3AP61247 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
RPS3AP61247 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.36□□□□□ -1.55
RPS3AP61247 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RPS3AP61247 DHFRP1-201ENST00000579682 559 ntBASIC5.36□□□□□ -1.55
RPS3AP61247 MIR4310-201ENST00000582950 57 ntBASIC5.36□□□□□ -1.55
RPS3AP61247 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.36□□□□□ -1.55
RPS3AP61247 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.36□□□□□ -1.55
RPS3AP61247 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.36□□□□□ -1.55
RPS3AP61247 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.36□□□□□ -1.55
RPS3AP61247 AL139099.4-201ENST00000614802 114 ntBASIC5.36□□□□□ -1.55
RPS3AP61247 AC024023.1-201ENST00000624530 922 ntBASIC5.36□□□□□ -1.55
RPS3AP61247 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.36□□□□□ -1.55
RPS3AP61247 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RPS3AP61247 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RPS3AP61247 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.36□□□□□ -1.55
RPS3AP61247 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.36□□□□□ -1.55
RPS3AP61247 AF287957.1-201ENST00000607368 1595 ntBASIC5.36□□□□□ -1.55
RPS3AP61247 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
RPS3AP61247 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RPS3AP61247 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.36□□□□□ -1.55
RPS3AP61247 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
RPS3AP61247 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RPS3AP61247 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RPS3AP61247 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RPS3AP61247 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RPS3AP61247 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.35□□□□□ -1.55
RPS3AP61247 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.35□□□□□ -1.55
RPS3AP61247 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RPS3AP61247 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RPS3AP61247 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RPS3AP61247 SELENOWP1-201ENST00000322792 252 ntBASIC5.35□□□□□ -1.55
RPS3AP61247 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RPS3AP61247 MIR16-2-201ENST00000362117 81 ntBASIC5.35□□□□□ -1.55
RPS3AP61247 SNORA63.3-201ENST00000362682 132 ntBASIC5.35□□□□□ -1.55
RPS3AP61247 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
RPS3AP61247 RNU4-27P-201ENST00000410889 139 ntBASIC5.35□□□□□ -1.55
RPS3AP61247 RPL35AP3-201ENST00000414680 288 ntBASIC5.35□□□□□ -1.55
RPS3AP61247 GTF3AP1-201ENST00000416942 1004 ntBASIC5.35□□□□□ -1.55
RPS3AP61247 AL035660.1-201ENST00000422041 222 ntBASIC5.35□□□□□ -1.55
RPS3AP61247 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RPS3AP61247 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.35□□□□□ -1.55
RPS3AP61247 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.35□□□□□ -1.55
RPS3AP61247 AC079807.1-201ENST00000429993 481 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms