Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
RIPK4P57078 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
RIPK4P57078 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RIPK4P57078 RN7SKP104-201ENST00000362605 328 ntBASIC6.66□□□□□ -1.34
RIPK4P57078 RNA5SP428-201ENST00000365129 132 ntBASIC6.66□□□□□ -1.34
RIPK4P57078 AL078599.1-201ENST00000402075 293 ntBASIC6.66□□□□□ -1.34
RIPK4P57078 AL035079.1-201ENST00000405210 287 ntBASIC6.66□□□□□ -1.34
RIPK4P57078 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.66□□□□□ -1.34
RIPK4P57078 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RIPK4P57078 NPM1P22-201ENST00000427761 952 ntBASIC6.66□□□□□ -1.34
RIPK4P57078 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC6.66□□□□□ -1.34
RIPK4P57078 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC6.66□□□□□ -1.34
RIPK4P57078 IGHV5-78-201ENST00000450948 295 ntBASIC6.66□□□□□ -1.34
RIPK4P57078 OTX2P1-201ENST00000450956 354 ntBASIC6.66□□□□□ -1.34
RIPK4P57078 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC6.66□□□□□ -1.34
RIPK4P57078 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RIPK4P57078 COX6B1P5-201ENST00000509843 249 ntBASIC6.66□□□□□ -1.34
RIPK4P57078 OR51A1P-201ENST00000511110 946 ntBASIC6.66□□□□□ -1.34
RIPK4P57078 RNA5SP43-201ENST00000516559 110 ntBASIC6.66□□□□□ -1.34
RIPK4P57078 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6.66□□□□□ -1.34
RIPK4P57078 OR5AZ1P-201ENST00000527448 943 ntBASIC6.66□□□□□ -1.34
RIPK4P57078 AC068993.1-201ENST00000546724 589 ntBASIC6.66□□□□□ -1.34
RIPK4P57078 AC009852.2-201ENST00000567898 485 ntBASIC6.66□□□□□ -1.34
RIPK4P57078 AC007342.5-201ENST00000571340 2142 ntBASIC6.66□□□□□ -1.34
RIPK4P57078 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC6.66□□□□□ -1.34
RIPK4P57078 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC6.66□□□□□ -1.34
RIPK4P57078 AC091932.2-201ENST00000623014 291 ntBASIC6.66□□□□□ -1.34
RIPK4P57078 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC6.66□□□□□ -1.34
RIPK4P57078 CASC19-222ENST00000641321 1173 ntBASIC6.66□□□□□ -1.34
RIPK4P57078 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
RIPK4P57078 AL138820.1-201ENST00000617901 5305 ntBASIC6.66□□□□□ -1.34
RIPK4P57078 AC093849.1-201ENST00000563631 2209 ntBASIC6.66□□□□□ -1.34
RIPK4P57078 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
RIPK4P57078 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RIPK4P57078 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
RIPK4P57078 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
RIPK4P57078 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RIPK4P57078 AC073136.1-201ENST00000449426 2884 ntBASIC6.66□□□□□ -1.34
RIPK4P57078 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
RIPK4P57078 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
RIPK4P57078 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC6.66□□□□□ -1.34
RIPK4P57078 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
RIPK4P57078 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
RIPK4P57078 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RIPK4P57078 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RIPK4P57078 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RIPK4P57078 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.34
RIPK4P57078 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
RIPK4P57078 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.65□□□□□ -1.34
RIPK4P57078 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
RIPK4P57078 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RIPK4P57078 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
RIPK4P57078 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
RIPK4P57078 SNORA66-201ENST00000384792 133 ntBASIC6.65□□□□□ -1.34
RIPK4P57078 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.65□□□□□ -1.34
RIPK4P57078 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.65□□□□□ -1.34
RIPK4P57078 TCEA1P1-201ENST00000449716 880 ntBASIC6.65□□□□□ -1.34
RIPK4P57078 snoU13.20-201ENST00000459180 104 ntBASIC6.65□□□□□ -1.34
RIPK4P57078 AC005412.2-201ENST00000492004 341 ntBASIC6.65□□□□□ -1.34
RIPK4P57078 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC6.65□□□□□ -1.34
RIPK4P57078 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC6.65□□□□□ -1.34
RIPK4P57078 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC6.65□□□□□ -1.34
RIPK4P57078 CASC19-203ENST00000523510 575 ntTSL 3 BASIC6.65□□□□□ -1.34
RIPK4P57078 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.65□□□□□ -1.34
RIPK4P57078 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.65□□□□□ -1.34
RIPK4P57078 AC016839.1-201ENST00000578162 867 ntBASIC6.65□□□□□ -1.34
RIPK4P57078 MIR4646-201ENST00000580775 63 ntBASIC6.65□□□□□ -1.34
RIPK4P57078 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.65□□□□□ -1.34
RIPK4P57078 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.65□□□□□ -1.34
RIPK4P57078 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
RIPK4P57078 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
RIPK4P57078 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
RIPK4P57078 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC6.65□□□□□ -1.35
RIPK4P57078 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
RIPK4P57078 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC6.65□□□□□ -1.35
RIPK4P57078 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
RIPK4P57078 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
RIPK4P57078 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RIPK4P57078 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
RIPK4P57078 U3.32-201ENST00000408116 212 ntBASIC6.64□□□□□ -1.35
RIPK4P57078 SNORA77-201ENST00000408716 125 ntBASIC6.64□□□□□ -1.35
RIPK4P57078 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC6.64□□□□□ -1.35
RIPK4P57078 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC6.64□□□□□ -1.35
RIPK4P57078 GNG5P5-201ENST00000420444 220 ntBASIC6.64□□□□□ -1.35
RIPK4P57078 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.64□□□□□ -1.35
RIPK4P57078 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.64□□□□□ -1.35
RIPK4P57078 AL590762.4-201ENST00000425885 253 ntBASIC6.64□□□□□ -1.35
RIPK4P57078 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC6.64□□□□□ -1.35
RIPK4P57078 RPL12P3-201ENST00000440080 396 ntBASIC6.64□□□□□ -1.35
RIPK4P57078 PRPF38AP1-201ENST00000451976 933 ntBASIC6.64□□□□□ -1.35
RIPK4P57078 CBX1P2-201ENST00000453841 458 ntBASIC6.64□□□□□ -1.35
RIPK4P57078 RN7SL610P-201ENST00000463845 291 ntBASIC6.64□□□□□ -1.35
RIPK4P57078 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.64□□□□□ -1.35
RIPK4P57078 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RIPK4P57078 FGB-207ENST00000509493 1164 ntTSL 5 BASIC6.64□□□□□ -1.35
RIPK4P57078 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.64□□□□□ -1.35
RIPK4P57078 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.64□□□□□ -1.35
RIPK4P57078 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RIPK4P57078 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.64□□□□□ -1.35
RIPK4P57078 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms