Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CMC4P56277 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
CMC4P56277 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CMC4P56277 AC007342.5-201ENST00000571340 2142 ntBASIC3.89□□□□□ -1.79
CMC4P56277 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CMC4P56277 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
CMC4P56277 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CMC4P56277 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC3.89□□□□□ -1.79
CMC4P56277 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CMC4P56277 RARSP1-201ENST00000542842 1418 ntBASIC3.89□□□□□ -1.79
CMC4P56277 SYT14P1-202ENST00000600441 1448 ntBASIC3.89□□□□□ -1.79
CMC4P56277 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CMC4P56277 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC3.89□□□□□ -1.79
CMC4P56277 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC3.89□□□□□ -1.79
CMC4P56277 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC3.89□□□□□ -1.79
CMC4P56277 PABPC1P6-201ENST00000445594 1829 ntBASIC3.89□□□□□ -1.79
CMC4P56277 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC3.89□□□□□ -1.79
CMC4P56277 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CMC4P56277 MIR589-201ENST00000385238 99 ntBASIC3.89□□□□□ -1.79
CMC4P56277 MIR1182-201ENST00000408363 97 ntBASIC3.89□□□□□ -1.79
CMC4P56277 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC3.89□□□□□ -1.79
CMC4P56277 PTP4A1P1-201ENST00000420539 515 ntBASIC3.89□□□□□ -1.79
CMC4P56277 DDX39BP1-205ENST00000422507 192 ntBASIC3.89□□□□□ -1.79
CMC4P56277 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CMC4P56277 OR6C71P-201ENST00000432580 913 ntBASIC3.89□□□□□ -1.79
CMC4P56277 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC3.89□□□□□ -1.79
CMC4P56277 AL138787.1-202ENST00000437804 898 ntBASIC3.89□□□□□ -1.79
CMC4P56277 MTCO3P17-201ENST00000443775 513 ntBASIC3.89□□□□□ -1.79
CMC4P56277 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC3.89□□□□□ -1.79
CMC4P56277 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC3.89□□□□□ -1.79
CMC4P56277 AC090804.1-201ENST00000448870 490 ntBASIC3.89□□□□□ -1.79
CMC4P56277 AC091180.1-201ENST00000462104 372 ntBASIC3.89□□□□□ -1.79
CMC4P56277 RN7SL443P-201ENST00000464331 290 ntBASIC3.89□□□□□ -1.79
CMC4P56277 COPS8P2-201ENST00000473228 627 ntBASIC3.89□□□□□ -1.79
CMC4P56277 AC147055.3-201ENST00000510547 851 ntBASIC3.89□□□□□ -1.79
CMC4P56277 IMPA1P1-201ENST00000510718 842 ntBASIC3.89□□□□□ -1.79
CMC4P56277 AC016559.2-201ENST00000510759 359 ntBASIC3.89□□□□□ -1.79
CMC4P56277 ASNSP4-201ENST00000511103 447 ntBASIC3.89□□□□□ -1.79
CMC4P56277 RNU4-18P-201ENST00000516751 149 ntBASIC3.89□□□□□ -1.79
CMC4P56277 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.89□□□□□ -1.79
CMC4P56277 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC3.89□□□□□ -1.79
CMC4P56277 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC3.89□□□□□ -1.79
CMC4P56277 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC3.89□□□□□ -1.79
CMC4P56277 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CMC4P56277 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC3.89□□□□□ -1.79
CMC4P56277 MIR6839-201ENST00000620425 113 ntBASIC3.89□□□□□ -1.79
CMC4P56277 AC091932.2-201ENST00000623014 291 ntBASIC3.89□□□□□ -1.79
CMC4P56277 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC3.89□□□□□ -1.79
CMC4P56277 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC3.89□□□□□ -1.79
CMC4P56277 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
CMC4P56277 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
CMC4P56277 AC092451.3-201ENST00000625067 1343 ntBASIC3.89□□□□□ -1.79
CMC4P56277 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CMC4P56277 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CMC4P56277 AP001029.2-203ENST00000589795 4910 ntBASIC3.89□□□□□ -1.79
CMC4P56277 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CMC4P56277 MTCO1P22-201ENST00000604619 1360 ntBASIC3.89□□□□□ -1.79
CMC4P56277 LARS-201ENST00000274562 2213 ntTSL 2 BASIC3.89□□□□□ -1.79
CMC4P56277 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC3.89□□□□□ -1.79
CMC4P56277 AC104964.3-201ENST00000606115 2860 ntBASIC3.88□□□□□ -1.79
CMC4P56277 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
CMC4P56277 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CMC4P56277 THAP12P4-201ENST00000528321 2266 ntBASIC3.88□□□□□ -1.79
CMC4P56277 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CMC4P56277 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CMC4P56277 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CMC4P56277 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CMC4P56277 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC3.88□□□□□ -1.79
CMC4P56277 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CMC4P56277 U3.3-201ENST00000362986 216 ntBASIC3.88□□□□□ -1.79
CMC4P56277 RNU6ATAC21P-201ENST00000408656 126 ntBASIC3.88□□□□□ -1.79
CMC4P56277 RN7SKP126-201ENST00000411143 300 ntBASIC3.88□□□□□ -1.79
CMC4P56277 RNU2-22P-201ENST00000411266 212 ntBASIC3.88□□□□□ -1.79
CMC4P56277 GTF3AP1-201ENST00000416942 1004 ntBASIC3.88□□□□□ -1.79
CMC4P56277 VN1R31P-201ENST00000417498 730 ntBASIC3.88□□□□□ -1.79
CMC4P56277 AC234781.4-201ENST00000419384 244 ntBASIC3.88□□□□□ -1.79
CMC4P56277 UBE2V2P1-201ENST00000434717 398 ntBASIC3.88□□□□□ -1.79
CMC4P56277 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC3.88□□□□□ -1.79
CMC4P56277 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC3.88□□□□□ -1.79
CMC4P56277 MED28P3-201ENST00000444288 531 ntBASIC3.88□□□□□ -1.79
CMC4P56277 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC3.88□□□□□ -1.79
CMC4P56277 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC3.88□□□□□ -1.79
CMC4P56277 RPS26P41-201ENST00000450370 284 ntBASIC3.88□□□□□ -1.79
CMC4P56277 OR52E3P-201ENST00000452083 936 ntBASIC3.88□□□□□ -1.79
CMC4P56277 AC104634.1-201ENST00000452720 462 ntBASIC3.88□□□□□ -1.79
CMC4P56277 AC239798.3-201ENST00000454459 408 ntBASIC3.88□□□□□ -1.79
CMC4P56277 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC3.88□□□□□ -1.79
CMC4P56277 AC097484.1-201ENST00000471148 389 ntBASIC3.88□□□□□ -1.79
CMC4P56277 AC128716.1-201ENST00000475129 166 ntBASIC3.88□□□□□ -1.79
CMC4P56277 AC109462.1-201ENST00000491087 368 ntBASIC3.88□□□□□ -1.79
CMC4P56277 HIGD1AP14-201ENST00000507617 282 ntBASIC3.88□□□□□ -1.79
CMC4P56277 RN7SKP66-201ENST00000516681 231 ntBASIC3.88□□□□□ -1.79
CMC4P56277 RNA5SP373-201ENST00000517271 95 ntBASIC3.88□□□□□ -1.79
CMC4P56277 IGHVII-44-2-201ENST00000517728 250 ntBASIC3.88□□□□□ -1.79
CMC4P56277 TBCA-207ENST00000520039 157 ntTSL 3 BASIC3.88□□□□□ -1.79
CMC4P56277 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC3.88□□□□□ -1.79
CMC4P56277 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC3.88□□□□□ -1.79
CMC4P56277 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC3.88□□□□□ -1.79
CMC4P56277 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CMC4P56277 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms