Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
NR1H2P55055 AL353796.1-201ENST00000561542 3241 ntBASIC5.5□□□□□ -1.53
NR1H2P55055 AC093225.1-201ENST00000506867 1408 ntBASIC5.5□□□□□ -1.53
NR1H2P55055 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NR1H2P55055 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
NR1H2P55055 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NR1H2P55055 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
NR1H2P55055 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
NR1H2P55055 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
NR1H2P55055 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
NR1H2P55055 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NR1H2P55055 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
NR1H2P55055 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NR1H2P55055 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
NR1H2P55055 AC023490.2-201ENST00000359859 470 ntBASIC5.5□□□□□ -1.53
NR1H2P55055 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.5□□□□□ -1.53
NR1H2P55055 SNORA43.1-201ENST00000364863 140 ntBASIC5.5□□□□□ -1.53
NR1H2P55055 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
NR1H2P55055 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NR1H2P55055 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
NR1H2P55055 AL157702.1-201ENST00000398764 426 ntBASIC5.5□□□□□ -1.53
NR1H2P55055 AC010385.1-201ENST00000412374 256 ntBASIC5.5□□□□□ -1.53
NR1H2P55055 MYL6P5-201ENST00000412707 459 ntBASIC5.5□□□□□ -1.53
NR1H2P55055 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.5□□□□□ -1.53
NR1H2P55055 LINC01347-201ENST00000417964 355 ntBASIC5.5□□□□□ -1.53
NR1H2P55055 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NR1H2P55055 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.5□□□□□ -1.53
NR1H2P55055 RPS3P2-201ENST00000421346 701 ntBASIC5.5□□□□□ -1.53
NR1H2P55055 RPS24P8-201ENST00000431490 402 ntBASIC5.5□□□□□ -1.53
NR1H2P55055 AL512661.1-201ENST00000434586 1253 ntBASIC5.5□□□□□ -1.53
NR1H2P55055 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC5.5□□□□□ -1.53
NR1H2P55055 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.5□□□□□ -1.53
NR1H2P55055 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC5.5□□□□□ -1.53
NR1H2P55055 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.5□□□□□ -1.53
NR1H2P55055 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.5□□□□□ -1.53
NR1H2P55055 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.5□□□□□ -1.53
NR1H2P55055 RN7SL72P-201ENST00000460697 269 ntBASIC5.5□□□□□ -1.53
NR1H2P55055 LSM3P4-201ENST00000502948 309 ntBASIC5.5□□□□□ -1.53
NR1H2P55055 ENPP7P11-201ENST00000505915 627 ntBASIC5.5□□□□□ -1.53
NR1H2P55055 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.5□□□□□ -1.53
NR1H2P55055 GAPDHP62-201ENST00000515313 990 ntBASIC5.5□□□□□ -1.53
NR1H2P55055 RNU6-334P-201ENST00000517072 102 ntBASIC5.5□□□□□ -1.53
NR1H2P55055 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.5□□□□□ -1.53
NR1H2P55055 MTND5P21-201ENST00000531961 522 ntBASIC5.5□□□□□ -1.53
NR1H2P55055 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.5□□□□□ -1.53
NR1H2P55055 AL121594.2-201ENST00000541658 472 ntBASIC5.5□□□□□ -1.53
NR1H2P55055 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.5□□□□□ -1.53
NR1H2P55055 AC092332.1-201ENST00000563684 829 ntBASIC5.5□□□□□ -1.53
NR1H2P55055 RBM22P12-201ENST00000567098 1255 ntBASIC5.5□□□□□ -1.53
NR1H2P55055 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.5□□□□□ -1.53
NR1H2P55055 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.5□□□□□ -1.53
NR1H2P55055 COX6CP7-201ENST00000597056 208 ntBASIC5.5□□□□□ -1.53
NR1H2P55055 ABI1P1-201ENST00000603375 1120 ntBASIC5.5□□□□□ -1.53
NR1H2P55055 AC011374.2-201ENST00000607135 526 ntBASIC5.5□□□□□ -1.53
NR1H2P55055 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.5□□□□□ -1.53
NR1H2P55055 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.5□□□□□ -1.53
NR1H2P55055 AL121890.2-201ENST00000617644 465 ntBASIC5.5□□□□□ -1.53
NR1H2P55055 AC022306.3-201ENST00000619930 550 ntBASIC5.5□□□□□ -1.53
NR1H2P55055 AC129778.1-202ENST00000623812 261 ntBASIC5.5□□□□□ -1.53
NR1H2P55055 AL591379.1-207ENST00000635982 261 ntBASIC5.5□□□□□ -1.53
NR1H2P55055 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.5□□□□□ -1.53
NR1H2P55055 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.5□□□□□ -1.53
NR1H2P55055 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NR1H2P55055 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NR1H2P55055 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.5□□□□□ -1.53
NR1H2P55055 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
NR1H2P55055 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.5□□□□□ -1.53
NR1H2P55055 AC096656.1-201ENST00000623826 1364 ntBASIC5.5□□□□□ -1.53
NR1H2P55055 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NR1H2P55055 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NR1H2P55055 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.5□□□□□ -1.53
NR1H2P55055 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NR1H2P55055 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NR1H2P55055 GTF2H2B-203ENST00000508065 1432 ntBASIC5.49□□□□□ -1.53
NR1H2P55055 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NR1H2P55055 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NR1H2P55055 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
NR1H2P55055 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
NR1H2P55055 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.49□□□□□ -1.53
NR1H2P55055 SNORA62.2-201ENST00000364672 152 ntBASIC5.49□□□□□ -1.53
NR1H2P55055 RNA5SP510-201ENST00000364697 99 ntBASIC5.49□□□□□ -1.53
NR1H2P55055 LYPLA1P3-201ENST00000402650 695 ntBASIC5.49□□□□□ -1.53
NR1H2P55055 UQCRFS1P3-201ENST00000407697 385 ntBASIC5.49□□□□□ -1.53
NR1H2P55055 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.49□□□□□ -1.53
NR1H2P55055 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC5.49□□□□□ -1.53
NR1H2P55055 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.49□□□□□ -1.53
NR1H2P55055 AC008173.1-201ENST00000418901 264 ntBASIC5.49□□□□□ -1.53
NR1H2P55055 AL354692.1-201ENST00000423044 315 ntBASIC5.49□□□□□ -1.53
NR1H2P55055 AC130360.1-201ENST00000425489 1117 ntBASIC5.49□□□□□ -1.53
NR1H2P55055 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.49□□□□□ -1.53
NR1H2P55055 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.49□□□□□ -1.53
NR1H2P55055 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.49□□□□□ -1.53
NR1H2P55055 PNKDP1-201ENST00000435914 430 ntBASIC5.49□□□□□ -1.53
NR1H2P55055 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC5.49□□□□□ -1.53
NR1H2P55055 AL391987.1-201ENST00000441025 200 ntBASIC5.49□□□□□ -1.53
NR1H2P55055 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC5.49□□□□□ -1.53
NR1H2P55055 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.49□□□□□ -1.53
NR1H2P55055 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.49□□□□□ -1.53
NR1H2P55055 RPL7AP52-201ENST00000458096 790 ntBASIC5.49□□□□□ -1.53
NR1H2P55055 ACA64.4-201ENST00000459070 127 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms