Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.47□□□□□ -1.37
EPHB3P54753 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.47□□□□□ -1.37
EPHB3P54753 SETP20-201ENST00000457046 852 ntBASIC6.47□□□□□ -1.37
EPHB3P54753 AC018638.3-201ENST00000461273 132 ntBASIC6.47□□□□□ -1.37
EPHB3P54753 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.47□□□□□ -1.37
EPHB3P54753 AC026254.2-201ENST00000475295 371 ntBASIC6.47□□□□□ -1.37
EPHB3P54753 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
EPHB3P54753 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC6.47□□□□□ -1.37
EPHB3P54753 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC6.47□□□□□ -1.37
EPHB3P54753 AC008565.1-201ENST00000509046 885 ntBASIC6.47□□□□□ -1.37
EPHB3P54753 IGKV3D-34-201ENST00000522638 302 ntBASIC6.47□□□□□ -1.37
EPHB3P54753 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.47□□□□□ -1.37
EPHB3P54753 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.47□□□□□ -1.37
EPHB3P54753 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.47□□□□□ -1.37
EPHB3P54753 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC6.47□□□□□ -1.37
EPHB3P54753 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.47□□□□□ -1.37
EPHB3P54753 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC6.47□□□□□ -1.37
EPHB3P54753 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.47□□□□□ -1.37
EPHB3P54753 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.47□□□□□ -1.37
EPHB3P54753 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC6.47□□□□□ -1.37
EPHB3P54753 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.47□□□□□ -1.37
EPHB3P54753 RN7SL753P-201ENST00000581238 290 ntBASIC6.47□□□□□ -1.37
EPHB3P54753 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.47□□□□□ -1.37
EPHB3P54753 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.47□□□□□ -1.37
EPHB3P54753 VN1R90P-201ENST00000595717 726 ntBASIC6.47□□□□□ -1.37
EPHB3P54753 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
EPHB3P54753 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.47□□□□□ -1.37
EPHB3P54753 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC6.47□□□□□ -1.37
EPHB3P54753 AL020997.3-201ENST00000602843 359 ntBASIC6.47□□□□□ -1.37
EPHB3P54753 AL645933.2-201ENST00000606743 1207 ntBASIC6.47□□□□□ -1.37
EPHB3P54753 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.47□□□□□ -1.37
EPHB3P54753 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.47□□□□□ -1.37
EPHB3P54753 AC024595.1-201ENST00000623088 387 ntBASIC6.47□□□□□ -1.37
EPHB3P54753 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC6.47□□□□□ -1.37
EPHB3P54753 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
EPHB3P54753 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.47□□□□□ -1.37
EPHB3P54753 AC004520.1-201ENST00000608362 1413 ntBASIC6.47□□□□□ -1.37
EPHB3P54753 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
EPHB3P54753 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
EPHB3P54753 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
EPHB3P54753 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.47□□□□□ -1.37
EPHB3P54753 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.47□□□□□ -1.37
EPHB3P54753 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
EPHB3P54753 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
EPHB3P54753 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
EPHB3P54753 Z93929.1-201ENST00000418200 1475 ntBASIC6.47□□□□□ -1.37
EPHB3P54753 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.47□□□□□ -1.37
EPHB3P54753 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
EPHB3P54753 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.46□□□□□ -1.37
EPHB3P54753 DOCK11P1-201ENST00000553480 5932 ntBASIC6.46□□□□□ -1.37
EPHB3P54753 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.37
EPHB3P54753 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.46□□□□□ -1.37
EPHB3P54753 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.46□□□□□ -1.37
EPHB3P54753 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
EPHB3P54753 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
EPHB3P54753 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.46□□□□□ -1.37
EPHB3P54753 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
EPHB3P54753 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
EPHB3P54753 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
EPHB3P54753 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.46□□□□□ -1.38
EPHB3P54753 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
EPHB3P54753 RNFT1P3-201ENST00000340898 1052 ntBASIC6.46□□□□□ -1.38
EPHB3P54753 RNA5SP273-201ENST00000362484 113 ntBASIC6.46□□□□□ -1.38
EPHB3P54753 Y_RNA.88-201ENST00000363029 99 ntBASIC6.46□□□□□ -1.38
EPHB3P54753 RNU6-236P-201ENST00000363886 106 ntBASIC6.46□□□□□ -1.38
EPHB3P54753 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
EPHB3P54753 TAF9BP2-201ENST00000400856 499 ntBASIC6.46□□□□□ -1.38
EPHB3P54753 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.38
EPHB3P54753 RPS3AP24-201ENST00000407896 734 ntBASIC6.46□□□□□ -1.38
EPHB3P54753 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
EPHB3P54753 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC6.46□□□□□ -1.38
EPHB3P54753 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC6.46□□□□□ -1.38
EPHB3P54753 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.46□□□□□ -1.38
EPHB3P54753 TNPO1P1-201ENST00000423641 1138 ntBASIC6.46□□□□□ -1.38
EPHB3P54753 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC6.46□□□□□ -1.38
EPHB3P54753 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC6.46□□□□□ -1.38
EPHB3P54753 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.46□□□□□ -1.38
EPHB3P54753 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
EPHB3P54753 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC6.46□□□□□ -1.38
EPHB3P54753 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC6.46□□□□□ -1.38
EPHB3P54753 Y_RNA.667-201ENST00000516212 107 ntBASIC6.46□□□□□ -1.38
EPHB3P54753 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC6.46□□□□□ -1.38
EPHB3P54753 NDUFS5P6-201ENST00000529136 295 ntBASIC6.46□□□□□ -1.38
EPHB3P54753 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC6.46□□□□□ -1.38
EPHB3P54753 RPA2P3-201ENST00000533268 770 ntBASIC6.46□□□□□ -1.38
EPHB3P54753 OR4A6P-201ENST00000534364 970 ntBASIC6.46□□□□□ -1.38
EPHB3P54753 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.46□□□□□ -1.38
EPHB3P54753 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC6.46□□□□□ -1.38
EPHB3P54753 AC068305.2-201ENST00000550567 1205 ntBASIC6.46□□□□□ -1.38
EPHB3P54753 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC6.46□□□□□ -1.38
EPHB3P54753 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.46□□□□□ -1.38
EPHB3P54753 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.46□□□□□ -1.38
EPHB3P54753 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.46□□□□□ -1.38
EPHB3P54753 RBM22P1-201ENST00000578589 1214 ntBASIC6.46□□□□□ -1.38
EPHB3P54753 AP005119.1-201ENST00000580956 292 ntBASIC6.46□□□□□ -1.38
EPHB3P54753 MIR3614-201ENST00000581261 86 ntBASIC6.46□□□□□ -1.38
EPHB3P54753 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC6.46□□□□□ -1.38
EPHB3P54753 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.46□□□□□ -1.38
EPHB3P54753 AC016877.3-201ENST00000606778 504 ntBASIC6.46□□□□□ -1.38
EPHB3P54753 AC116651.1-201ENST00000609724 556 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms