Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AL157392.4-201ENST00000609756 345 ntBASIC6.76□□□□□ -1.33
MRE11P49959 AC008759.3-201ENST00000613300 508 ntBASIC6.76□□□□□ -1.33
MRE11P49959 AP002791.1-201ENST00000623291 381 ntBASIC6.76□□□□□ -1.33
MRE11P49959 AP000550.3-201ENST00000637734 379 ntBASIC6.76□□□□□ -1.33
MRE11P49959 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
MRE11P49959 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6.76□□□□□ -1.33
MRE11P49959 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.76□□□□□ -1.33
MRE11P49959 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
MRE11P49959 AC010401.2-201ENST00000575137 4934 ntBASIC6.76□□□□□ -1.33
MRE11P49959 NAMPTP1-201ENST00000440465 2514 ntBASIC6.76□□□□□ -1.33
MRE11P49959 AC011755.1-201ENST00000623763 2049 ntBASIC6.76□□□□□ -1.33
MRE11P49959 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
MRE11P49959 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
MRE11P49959 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC6.76□□□□□ -1.33
MRE11P49959 HSPD1P9-201ENST00000420325 1636 ntBASIC6.76□□□□□ -1.33
MRE11P49959 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
MRE11P49959 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
MRE11P49959 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.75□□□□□ -1.33
MRE11P49959 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.75□□□□□ -1.33
MRE11P49959 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
MRE11P49959 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
MRE11P49959 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
MRE11P49959 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
MRE11P49959 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
MRE11P49959 ZNF29P-201ENST00000225587 168 ntBASIC6.75□□□□□ -1.33
MRE11P49959 RNU5E-10P-201ENST00000363506 118 ntBASIC6.75□□□□□ -1.33
MRE11P49959 U3.52-201ENST00000384034 216 ntBASIC6.75□□□□□ -1.33
MRE11P49959 AP002530.1-201ENST00000405705 684 ntBASIC6.75□□□□□ -1.33
MRE11P49959 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.75□□□□□ -1.33
MRE11P49959 RNU4-34P-201ENST00000410431 124 ntBASIC6.75□□□□□ -1.33
MRE11P49959 DPPA2P3-201ENST00000411853 655 ntBASIC6.75□□□□□ -1.33
MRE11P49959 TCEA1P2-201ENST00000420496 906 ntBASIC6.75□□□□□ -1.33
MRE11P49959 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.75□□□□□ -1.33
MRE11P49959 MTCO1P51-201ENST00000427672 1060 ntBASIC6.75□□□□□ -1.33
MRE11P49959 ZNF965P-201ENST00000432501 817 ntBASIC6.75□□□□□ -1.33
MRE11P49959 AC112492.2-201ENST00000432774 1030 ntBASIC6.75□□□□□ -1.33
MRE11P49959 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC6.75□□□□□ -1.33
MRE11P49959 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.75□□□□□ -1.33
MRE11P49959 AL359265.1-201ENST00000440296 795 ntBASIC6.75□□□□□ -1.33
MRE11P49959 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.75□□□□□ -1.33
MRE11P49959 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC6.75□□□□□ -1.33
MRE11P49959 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC6.75□□□□□ -1.33
MRE11P49959 RPL7P61-201ENST00000451721 751 ntBASIC6.75□□□□□ -1.33
MRE11P49959 SDC4P-201ENST00000453285 601 ntBASIC6.75□□□□□ -1.33
MRE11P49959 AC091685.2-201ENST00000454924 864 ntBASIC6.75□□□□□ -1.33
MRE11P49959 SNORD11.1-201ENST00000459482 85 ntBASIC6.75□□□□□ -1.33
MRE11P49959 AC108161.1-201ENST00000461060 402 ntBASIC6.75□□□□□ -1.33
MRE11P49959 AL603882.1-201ENST00000463059 681 ntBASIC6.75□□□□□ -1.33
MRE11P49959 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.75□□□□□ -1.33
MRE11P49959 NDUFA5P12-201ENST00000503796 343 ntBASIC6.75□□□□□ -1.33
MRE11P49959 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.75□□□□□ -1.33
MRE11P49959 MTND4LP31-201ENST00000514859 294 ntBASIC6.75□□□□□ -1.33
MRE11P49959 RNU5A-7P-201ENST00000515979 116 ntBASIC6.75□□□□□ -1.33
MRE11P49959 TMEM97P2-201ENST00000517841 403 ntBASIC6.75□□□□□ -1.33
MRE11P49959 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC6.75□□□□□ -1.33
MRE11P49959 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
MRE11P49959 AP001858.2-201ENST00000536213 601 ntBASIC6.75□□□□□ -1.33
MRE11P49959 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.75□□□□□ -1.33
MRE11P49959 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
MRE11P49959 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC6.75□□□□□ -1.33
MRE11P49959 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.75□□□□□ -1.33
MRE11P49959 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.75□□□□□ -1.33
MRE11P49959 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.75□□□□□ -1.33
MRE11P49959 MIR8084-201ENST00000614105 89 ntBASIC6.75□□□□□ -1.33
MRE11P49959 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
MRE11P49959 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.75□□□□□ -1.33
MRE11P49959 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
MRE11P49959 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6.75□□□□□ -1.33
MRE11P49959 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
MRE11P49959 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.74□□□□□ -1.33
MRE11P49959 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.74□□□□□ -1.33
MRE11P49959 CASC19-238ENST00000641523 1558 ntBASIC6.74□□□□□ -1.33
MRE11P49959 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
MRE11P49959 AC005261.6-201ENST00000623072 1387 ntBASIC6.74□□□□□ -1.33
MRE11P49959 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
MRE11P49959 AL592310.1-201ENST00000414330 671 ntBASIC6.74□□□□□ -1.33
MRE11P49959 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC6.74□□□□□ -1.33
MRE11P49959 RPL12P18-201ENST00000437175 325 ntBASIC6.74□□□□□ -1.33
MRE11P49959 AC096775.1-201ENST00000437724 448 ntBASIC6.74□□□□□ -1.33
MRE11P49959 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC6.74□□□□□ -1.33
MRE11P49959 RPL36AP39-201ENST00000445859 318 ntBASIC6.74□□□□□ -1.33
MRE11P49959 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC6.74□□□□□ -1.33
MRE11P49959 EIF2S2P2-201ENST00000447161 982 ntBASIC6.74□□□□□ -1.33
MRE11P49959 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
MRE11P49959 AC090543.1-201ENST00000492168 485 ntBASIC6.74□□□□□ -1.33
MRE11P49959 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC6.74□□□□□ -1.33
MRE11P49959 AC138409.2-202ENST00000507274 458 ntBASIC6.74□□□□□ -1.33
MRE11P49959 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.74□□□□□ -1.33
MRE11P49959 AC103833.1-201ENST00000517442 172 ntBASIC6.74□□□□□ -1.33
MRE11P49959 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6.74□□□□□ -1.33
MRE11P49959 AC112191.2-201ENST00000522428 333 ntBASIC6.74□□□□□ -1.33
MRE11P49959 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.74□□□□□ -1.33
MRE11P49959 AP003066.2-201ENST00000529375 555 ntBASIC6.74□□□□□ -1.33
MRE11P49959 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC6.74□□□□□ -1.33
MRE11P49959 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC6.74□□□□□ -1.33
MRE11P49959 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC6.74□□□□□ -1.33
MRE11P49959 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC6.74□□□□□ -1.33
MRE11P49959 HMGN2P47-201ENST00000559378 272 ntBASIC6.74□□□□□ -1.33
MRE11P49959 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC6.74□□□□□ -1.33
MRE11P49959 AP001496.3-201ENST00000580230 913 ntBASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms